Novosphingobium olei: NSDW_01520
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Entry
NSDW_01520 CDS
T09939
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nol
Novosphingobium olei
Brite
KEGG Orthology (KO) [BR:
nol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nol03009
]
NSDW_01520 (rimO)
Enzymes [BR:
nol01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NSDW_01520 (rimO)
Ribosome biogenesis [BR:
nol03009
]
Prokaryotic type
ribosomal protein modification factors
NSDW_01520 (rimO)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BEU99057
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All DBs
Position
complement(152353..153738)
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AA seq
461 aa
AA seq
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MASNTPVAIPDQPKVGMVSLGCPKALVDSERILTRLRADGYAMSADYAGADVVLVNTCGF
LDSAKEESLAAIGEAIAENGRVIVTGCMGNEAEVIRAKFPQVLAVTGAHQYEDVVEAVHE
AAPPSMGPYIDLIPQAEPGDVKLTPRHYSYLKISEGCNHACAFCIIPSLRGKLASRRIDA
VLREAEKLVAAGTRELLVISQDTSAYGVDVRHEERLWKGEPVRTHMTDLARELGKLRTPD
GQTPWVRLHYVYPYPHVDAVIPLMAQGLVTPYLDIPFQHASPNVLRAMKRPANEAKVLER
IKAWRAVCPDLAIRSSFVVGFPGETEADFQYLLDWLDEAQLDRVGAFRFEPVEGAAANDL
PDPVPEEVKEDRFRRIMEKTEAISAARLAAKVGRTIRVIVDEVGEPDEDGDIGATARSQA
DAPEIDGAVYLRNVPATLQPGDFADVLIEEADAHDLFGVIA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacactcctgtcgcgattcccgaccagccgaaagtcggcatggtcagcctc
ggctgccccaaggcgctggtcgattccgaacgcatcctcacgcgtctgcgcgccgatggc
tatgccatgagcgcggactatgccggcgccgacgtggtgctggtcaacacttgcggcttc
ctcgattcggccaaggaggaaagccttgccgcgattggtgaggccatcgccgaaaacggc
cgggtgatcgtcaccggctgcatgggcaacgaagccgaggtgatccgcgcgaagttcccg
caggtcctcgccgtcaccggcgcgcaccagtacgaagacgtggtcgaagcggtgcacgaa
gccgccccgcccagcatggggccgtacatcgacctgatcccgcaggccgagccgggcgat
gtgaagctcactccccgccactacagctacctgaagatttcagaggggtgcaaccacgcc
tgcgccttctgcatcatcccgtccttgcgcggaaagctcgccagccggcgcatcgatgcc
gtgctgcgcgaagccgaaaagctggtcgcggcgggcacgcgcgaactgctggtgatcagc
caggacacatcggcctatggcgtcgacgtgcgccatgaggaacgcctatggaagggcgag
ccggtccgcacccacatgaccgacctggcgcgcgaactcggcaagctgcgcacccccgat
gggcaaacgccgtgggtgcggctgcactatgtctatccctacccgcacgtcgacgcggtg
atcccgctgatggcgcaagggctcgtcacgccctacctcgacatcccgttccagcacgcc
agcccgaacgtgctgcgcgccatgaagcgcccggcgaacgaggccaaggtgctcgaacgc
atcaaggcctggcgagcagtgtgccccgaccttgccatccgttcgagcttcgtcgtcggc
ttccccggtgagaccgaggcggacttccagtacctgctcgactggctcgacgaagcgcag
ttggatcgcgtcggtgccttccgcttcgaacccgtcgaaggcgccgccgccaacgacctg
cccgatccggtgcccgaagaggtcaaggaagaccgcttccgccgcatcatggaaaagacc
gaggcgatcagcgccgcgcgcctcgccgccaaggtcggccgcacgatccgcgtgatcgtc
gacgaagtgggcgaaccggacgaagacggcgacatcggcgccaccgcgcgcagccaggcc
gacgcgcccgagatcgacggcgcggtgtacttgcgcaacgtgcccgccacgctgcagccg
ggcgacttcgccgacgtgctgatcgaggaagccgacgcgcacgacctgttcggggtgatt
gcgtaa
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