Nocardioides okcheonensis: LN652_10620
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Entry
LN652_10620 CDS
T07822
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
noq
Nocardioides okcheonensis
Pathway
noq00190
Oxidative phosphorylation
noq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
LN652_10620
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN652_10620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
noq03019
]
LN652_10620
Enzymes [BR:
noq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
LN652_10620
Messenger RNA biogenesis [BR:
noq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LN652_10620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
CCDC154
Motif
Other DBs
NCBI-ProteinID:
UFN46624
LinkDB
All DBs
Position
2193639..2195816
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AA seq
725 aa
AA seq
DB search
MNDPATLTSAVSPSVDEGPVTEPFGHPTDTFDVEPPYAPDAAEIAAVEKFEDRFIDREIS
WVRFNQRVLELAEDEGLPLLERARFLAIFASNLDEFFMVRVAGLKRRIAAGVAQRAASGM
MPREQLEVLWTACRELMERHARALAGLLPELGAQGIEIVRWVDLDREEQKVCKKLFKDRI
FPVLTPLAVDPAHPFPYISGLSLNLAVVVRHPKTGTEHFARVKVPPTFGRFVGLGNQRFV
PIEDVIGEHLKKLFPGMEVLGAHTFRVTRNEDLEVEEDDAENLLKALEKELLRRRFGPPV
RLEVEESIDPKVLDLLVSELGVGRDEVVSLPGPLDLTGLHSIADLPRDDLKYAAFLPTTH
SSLAEVESASPVDVFDSVARHDVLLHHPYDSFATSVQRFLEQAAADPHVLAIKQTLYRTS
GDSPIIEALIDAAEAGKQVLVIVEIKARFDEQANIRWARKLEHAGCHVVYGLVGLKTHCK
LSMVVRDEPDGIKRYVHLGTGNYNPKTARLYEDLGLLTSDPEIGEDVALLFNNLSGISRN
TTYDHLLVAPDSVRDGLIAQIHQEIAHHQAGRLARIRLKANSVVDEAVIDALYLASQAGV
PVELVVRGICALRPGVPGLSETIRVRSVLGRFLEHSRVFWFENDGDPAVWIGSADLMHRN
LDRRVEVLVRLRDTHVVESVASLLDLALDEETTAWELGPDGEWHQHHGVRHLHDELIAQQ
RHRRR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacccggccaccctgaccagcgccgtctcaccgtcggtggacgagggcccggtc
acggagcccttcggccacccgaccgacaccttcgacgtcgagccgccctacgcgccggac
gccgcggagatcgccgcggtcgagaagttcgaggaccggttcatcgaccgcgagatctcg
tgggtgcggttcaaccagcgggtactcgagctcgccgaggacgaggggctgccgctgctc
gagcgggcccgcttcctggcgatcttcgccagcaacctcgacgagttcttcatggtccgc
gtggccggcctcaagcgccgcatcgccgccggcgtcgcccagcgcgccgcgagcgggatg
atgccgcgcgagcagctcgaggtgctgtggaccgcctgccgcgagctgatggagcgccac
gcccgcgcgctcgccggcctgctgcccgagctcggcgcccagggcatcgagatcgtccgc
tgggtcgacctcgaccgcgaggagcagaaggtctgcaagaagctgttcaaggaccggatc
ttccccgtcctcacgccgctggccgtcgacccggcccaccccttcccctacatctccggc
ctctcgctcaacctcgccgtcgtcgtgcgccaccccaagaccggcacggagcacttcgcg
cgggtcaaggtgccgccgaccttcggccgcttcgtgggcctgggcaaccagcgcttcgtc
ccgatcgaggacgtcatcggcgagcacctcaagaagctgttccccggcatggaggtgctc
ggcgcgcacacgttccgcgtcacccgcaacgaggacctcgaggtcgaggaggacgacgcc
gagaacctcctcaaggcgctcgagaaggagctgctgcgccgccggttcggtccgcccgtg
cgactcgaggtcgaggagtcgatcgacccgaaggtcctcgacctgctggtctccgagctc
ggggtgggccgcgacgaggtggtgtccctgcccggtccgctcgacctgaccggcctgcac
tcgatcgccgacctcccgcgcgacgacctcaagtacgccgcgttcctccccaccacccac
agcagcctggccgaggtcgagtcggcgtcgccggtcgacgtgttcgactcggtcgcgcgc
cacgacgtgctgctgcaccacccctacgactcgttcgccacctccgtgcagcgcttcctc
gagcaggcggccgccgacccgcacgtgctggcgatcaagcagacgctctaccgcacctcc
ggcgacagcccgatcatcgaggcgctcatcgacgccgcggaggccggcaagcaggtgctg
gtgatcgtcgagatcaaggcccgcttcgacgagcaggccaacatccgctgggcgcgcaag
ctcgagcacgcgggctgccacgtcgtctacggcctggtcggcctcaagacccactgcaag
ctctcgatggtggtgcgcgacgagcccgacggcatcaagcgctacgtccacctcggcacc
ggcaactacaaccccaagacggcccggctctacgaggacctcggcctgctgacctccgac
ccggagatcggcgaggacgtggcgctgctgttcaacaacctctcgggcatcagccgcaac
accacctacgaccacctgctcgtcgcgcccgacagcgtgcgcgacgggttgatcgcgcag
atccaccaggagatcgcccaccaccaggccggccggctcgcccggatccggctgaaggcc
aactcggtggtcgacgaggccgtcatcgacgcgctctacctggcctcgcaggccggggtg
ccggtcgagctggtcgtccgcggcatctgcgcgctgcgccccggggtcccggggctgtcg
gagacgatccgggtgcggtcggtgctcggccggttcctcgagcacagccgcgtgttctgg
ttcgagaacgacggcgacccggcggtgtggatcggctcggccgacctgatgcaccgcaac
ctcgaccggcgcgtcgaggtgctggtgcggctgcgcgacacccacgtcgtggagtccgtc
gcgagcctgctcgacctcgcgctcgacgaggagaccaccgcctgggagctcggccccgac
ggcgagtggcaccagcaccacggcgtacgccacctgcacgacgagctcatcgcccagcag
cgtcaccgacgccgctga
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