Novosphingobium sp. THN1: C7W88_15695
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Entry
C7W88_15695 CDS
T05635
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
not
Novosphingobium sp. THN1
Pathway
not00190
Oxidative phosphorylation
not03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
not00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
C7W88_15695
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7W88_15695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
not03019
]
C7W88_15695
Enzymes [BR:
not01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
C7W88_15695
Messenger RNA biogenesis [BR:
not03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C7W88_15695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AXU20163
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All DBs
Position
3201867..3204038
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AA seq
723 aa
AA seq
DB search
MALVMSAGEIPTQIEGLPPVQERFFNRELSWLAFNRRVLAEAVNPDYPLLERLRFLSISG
SNLDEFMMVRVAGIAAQVRRQIDELSIDGQTPQQQLGALLDAVKNLIDAQQDVLADLKDE
LADAGIRIIDNDALNKGEAEWLRDYFEEHVVPVLTPQAIDPAHPFPFIANQGTGILFQLQ
RTADGAPVTEMILIPPALPRFVRLPGSRASWMGIEELVRRHATLLFPGFKILGDGTFRVL
RDSDIEVEEDAEDLVRYFRTAIQRRRRGKVILLHLQENFDAAAEKLLREQLRLDHALVIK
SRGLLAISGLSAVIEEDRQDLKFDPYNPRYPERILEHDGDCFSAIREKDLVIHHPYESFE
VVIDFLRQAAADPDVVAIKQTLYRAGKQSAVIAALIAAAEAGKSVTAVVELKARFDEEQN
LMWAAQLERAGVQVIYGFVDWKTHAKVSMVVRREGGGYRTYCHFGTGNYHPVTARIYTDL
SFFTADPRMGRDAGQLFNFVTGYVEPKQTELLAISPINLRERLYECIEREVTLARKGRPA
TIWAKLNQLTDPDLIDRLYLASMAGVEIRLVVRGICCLKPGVPGLSETIEVKSIIGRFLE
HSRIWAFGNGANLPNKRARVFISSADGMSRNMGRRVEVLVPVKNPTVHDQILDQVMLANL
LDTEQSWELGPDGEYERFEKGDPSFNLHGYFMTNPSLSGRGAALSKGRKVPKLALRRGAA
NRG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggctctggtaatgtcggcaggggaaattccaacgcagatcgaaggcttgccgcccgtg
caggagcggttcttcaatcgcgagctgagctggctggccttcaaccgccgcgtgctggcc
gaggcggtcaacccggattaccctctgctggagcgactgcggtttctttcgatcagcggc
agcaaccttgacgagttcatgatggtccgcgtggcagggatcgccgcgcaggtgcgccgc
cagatcgacgagctttcgatcgacgggcagaccccgcagcagcagctgggcgcgctgctc
gatgcggtgaagaacctgattgacgcgcagcaggacgtgctggccgatctcaaggacgaa
ctggccgatgccggcattcgcatcatcgacaacgatgccctgaacaagggtgaggccgag
tggctgcgcgactatttcgaggaacacgtcgtcccggtgctgacgccacaggcgatcgat
ccggcgcaccccttccccttcatcgccaatcagggcaccggaatcctgttccagctgcag
cgcaccgcggacggtgcgccggtgacggaaatgatcctgatcccgcctgccctgccccgc
ttcgtccgtctgccgggtagccgggcttcgtggatggggatcgaggaactggtgcggcgc
catgcgacgctgctgtttcccggcttcaagatcctgggcgacggcacgttccgcgtgctg
cgcgacagtgacatcgaagtggaggaagacgccgaggacctcgtccgctacttccgtact
gcgatccagcggcggcggcgcggcaaggtgatcctgctgcacttgcaggaaaacttcgat
gccgctgccgaaaaactgctgcgcgagcaattgcggctcgatcatgcgctggtgatcaag
agccggggcctgctggcgatcagcgggctttctgcggtgatcgaggaggaccggcaggat
ctgaagttcgatccctacaacccgcgctaccccgaacgcattctcgaacatgacggtgat
tgcttctctgccatccgcgagaaggatctggtgatccaccacccttacgagagcttcgag
gtggtgatcgacttcctgcggcaggctgcggccgatcccgacgtggtggcgatcaagcag
acgctctatcgcgccgggaaacagtccgccgtgatcgcagcgctgatcgcggcggcagag
gccggcaagtcagtgacggcagtggtcgaactcaaggcccgcttcgacgaggagcagaac
ctgatgtgggccgcgcagcttgaacgcgcgggcgttcaggtgatctacggcttcgtcgac
tggaagactcacgccaaggtgagcatggtggtgcggcgtgaaggtggcggatatcgcacc
tactgccacttcggcaccggcaactatcatccggtcaccgcgcgcatctataccgacctg
tcattcttcactgccgacccgcgcatgggccgtgatgccgggcagctgttcaacttcgtc
accggctatgtcgagcccaagcagaccgaactgctggcgatcagtccgatcaacctgcgc
gagcggctgtacgaatgcatcgagcgtgaagtcacgctggcgcgcaagggccgtcccgcc
acgatctgggccaagctcaaccagttgaccgaccctgacctgatcgaccggctctacctt
gccagcatggcgggcgtggagatccggctggtggtgcgcgggatctgctgcctcaagcct
ggcgtgccggggctttcggagacgatcgaggtgaagtcgatcatcgggcggttccttgag
cacagccgcatctgggctttcggcaacggggccaacctgcccaacaagcgggcgcgggtg
ttcatctcctcggccgacgggatgagccgcaacatgggacggcgggtggaagtgctggtg
ccggtcaagaacccgacggtgcacgatcagatcctcgaccaggtgatgctggccaacctg
ctggataccgaacagagctgggaactgggaccggacggcgagtacgagcggttcgagaag
ggcgacccctcgttcaacctccacggctatttcatgaccaacccgtcgctttccgggcgt
ggtgcagcgctttccaagggaagaaaggttccaaagcttgcgttgcggcgcggcgcggct
aaccgtggctga
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