Novosphingobium sp. P6W: TQ38_025025
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Entry
TQ38_025025 CDS
T05550
Symbol
ligA
Name
(GenBank) protocatechuate 4,5-dioxygenase subunit alpha
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00362
Benzoate degradation
nov00624
Polycyclic aromatic hydrocarbon degradation
nov00627
Aminobenzoate degradation
nov01100
Metabolic pathways
nov01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TQ38_025025 (ligA)
00627 Aminobenzoate degradation
TQ38_025025 (ligA)
00624 Polycyclic aromatic hydrocarbon degradation
TQ38_025025 (ligA)
Enzymes [BR:
nov01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
TQ38_025025 (ligA)
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Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
AXB79695
UniProt:
A0A2Z5EJ16
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All DBs
Position
2:complement(2064099..2064545)
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AA seq
148 aa
AA seq
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MSGPRDIHGYLGEFEDIPGTRVYTAARARQGYHLNQFAMSLMKAENRTRWLANEAAYLDE
WPMTPGQKAAVLARDYNLLLDLGGNIYFLAKVFSTDGFSFLQAVSTMTGMSVEEYSAMMN
AGGRSPEGVRSITANRAAEGDPAIRKQR
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggaccacgcgatatccacggatacctcggcgagttcgaggatattcccggcacc
cgcgtctacaccgccgcgcgggcacggcagggctatcacctcaaccagttcgcgatgagc
ctgatgaaggccgaaaaccgcacccgctggctggccaacgaagccgcctacctcgacgaa
tggccgatgacgccgggccagaaggcagccgtgctggcgcgcgattacaacttgctgctc
gaccttggcggcaacatctattttctagcaaaagtcttctcgaccgatggcttcagcttc
ctgcaggcggtcagcaccatgaccggcatgagcgtggaagaatactcggcgatgatgaac
gccggcggccgctcgcccgaaggtgtacggtccatcacagccaaccgtgcagccgagggc
gatccggcgataaggaagcagcgctga
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