Novosphingobium sp. P6W: TQ38_028410
Help
Entry
TQ38_028410 CDS
T05550
Symbol
ligA
Name
(GenBank) protocatechuate 4,5-dioxygenase subunit alpha
KO
K04100
protocatechuate 4,5-dioxygenase, alpha chain [EC:
1.13.11.8
]
Organism
nov
Novosphingobium sp. P6W
Pathway
nov00362
Benzoate degradation
nov00624
Polycyclic aromatic hydrocarbon degradation
nov00627
Aminobenzoate degradation
nov01100
Metabolic pathways
nov01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
nov00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
TQ38_028410 (ligA)
00627 Aminobenzoate degradation
TQ38_028410 (ligA)
00624 Polycyclic aromatic hydrocarbon degradation
TQ38_028410 (ligA)
Enzymes [BR:
nov01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
TQ38_028410 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigA
Motif
Other DBs
NCBI-ProteinID:
AXB80476
UniProt:
A0A2Z5ELN6
LinkDB
All DBs
Position
pP6W1:608481..608927
Genome browser
AA seq
148 aa
AA seq
DB search
MSGPRNIHEYLGEFDDIPGTRVYTAARARQGYHLNQFAMSLMKAENRVRWLADEAGYLDE
WPMTQDQKVAVLARDYNRLLDLGGNIYFLAKVFSTDGLSFLQAVSTMTGMSVEDYSAMMN
AGGRSPEGARSIKATRDAEGDADNKELR
NT seq
447 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggccccagaaacatacacgagtatctcggcgagttcgacgacattcccggcacc
cgggtctacaccgccgcacgggcgcgccagggctatcacctcaaccagttcgcaatgagc
ctgatgaaggccgagaaccgcgtccgctggctggcggacgaggccgggtacctcgacgaa
tggccgatgacgcaggaccagaaggtggccgtgctcgcgcgcgactacaaccgcctgctc
gaccttggcggcaacatctacttcctcgccaaggtgttctccaccgacggcctcagcttc
ctgcaggcggtctcgacgatgaccggcatgagcgtggaggactattcggcgatgatgaac
gccggcggccgctcgcccgaaggggcgcgctcgatcaaggccacccgggacgcagaaggc
gacgctgacaacaaggagcttcgctga
DBGET
integrated database retrieval system
