Nonomuraea phyllanthi: GBF35_45270
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Entry
GBF35_45270 CDS
T06257
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
now
Nonomuraea phyllanthi
Pathway
now00190
Oxidative phosphorylation
now03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
now00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
GBF35_45270
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GBF35_45270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
now03019
]
GBF35_45270
Enzymes [BR:
now01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
GBF35_45270
Messenger RNA biogenesis [BR:
now03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GBF35_45270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
QFY12831
LinkDB
All DBs
Position
9863375..9865435
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AA seq
686 aa
AA seq
DB search
MSAEPFQASNDLPLPQERFLNREESWLQFNERVLELAEDASLPLLERVRFLAIFASNLDE
FFRVRVAGLKRRMATGLLLRTKSGLKPREELARIGTIADELARRHAAVFHQQVCPQLAAE
GIEIARWDDLGREERTALRKLFRERIRPVLTPLAVDPAHPFPYISGLSLNLAVLVRNPAT
DHTVFARVKVPSQLPRFVPASKDRFVPLEDVIAAHLGQLFKGMEILQHHVFRVTRNEDLD
VDEDVTENLMQALEKELLKRRFGPPVRLEVEDTITPEVLAPLVEELELAPHEIYRVQGPL
DLSGLHAIADLERGELSYRPFVPAEVINADDDIFSILRERDVLLHHPYDSFATSVQRFIE
VAAADPRVLAIKQTLYRTSGESPIVDALIDAAEAGKQVVVVVEIKARFDEHANISWARKL
EKAGCHVVYGVVGLKTHCKLALVVRQEPSGELSRYCHIGTGNYNPKTARQYEDFGLLTAD
PLVGEDVTDLFIHLTGYSHHSAYRRLLVAPHSMRSGLLARIEREISHARAGRPARIRIKT
NSLVDEPIIDALYRASRAGVPVDLWVRGICSLRPGIPDLSENIRVRSVLGRFLEHSRVYE
FGLGRRPEVWIGSADLMRRNLDRRVEALVKVTSPQHKAYLVELMDLVMADGTNAWWLNSD
GTWVRHPGEDPQSHLIGTRRWRTVDD
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggaaccgtttcaagcgtccaacgacctgccactgcctcaggagcggttcctc
aatcgcgaggaaagctggctccagttcaacgagcgggtgctggagctggccgaggacgct
tcgcttccgctgctggagcgggtccgcttcctggcgatcttcgcgagcaacctcgacgag
ttcttccgcgtacgggtggcgggcctgaaacggcgcatggccacgggcctgctgctgcgg
accaagagcgggctgaagccgcgcgaggaactcgccaggatcggcacgatcgcggacgaa
ctggccaggcggcacgccgcggtcttccaccagcaggtctgcccgcagctggcggccgag
ggcatcgagatcgccaggtgggacgacctgggccgcgaggagcgtacggcgctgcgcaag
ctcttcagggagcggatcaggcccgtgctgacgccgctggccgtggaccccgcacacccc
tttccttatatttctgggctcagccttaatctggccgttctggtgcgcaatccggcgacc
gatcacacggtgttcgccagggtcaaggttccgtcgcagctgccccggttcgtacccgcc
tcaaaggacaggttcgtcccgctcgaagatgtcatcgccgcacatctcggacagctcttc
aagggcatggagatcctccagcaccacgtcttccgcgtcaccaggaacgaggacctggac
gtggacgaggacgtcaccgagaacctcatgcaggcgctggagaaggagctgctcaagcgg
cgcttcggcccgccggtgcggctggaggtcgaggacacgatcaccccggaggtgctggct
ccgctggtggaggagctggagctggcgccgcacgagatctaccgcgtgcagggcccgctc
gacctgtcaggcctgcacgccatcgccgacctggagcggggcgagctgagctaccggccg
ttcgtgccggccgaggtgatcaacgccgacgacgacatcttctcgatcctgcgcgagcgg
gacgtgctgctgcaccacccgtacgactcgttcgccaccagcgtgcagcgcttcatcgag
gtggccgcggccgacccccgggtgctggcgatcaagcagaccctctaccgcaccagcggc
gagtcccccatcgtcgacgcgctgatcgacgcggccgaggcgggcaagcaggtcgtggtg
gtcgtggagatcaaggcccgcttcgacgagcacgccaacatctcctgggcccgcaagctg
gagaaggccggctgccacgtcgtctacggcgtggtcgggctgaagacccactgcaagctc
gcgctcgtggtccgccaggagccctcgggcgagctgagccgctactgccacatcggcacc
ggcaactacaaccccaagaccgcccggcagtacgaggacttcgggctgctcacggccgac
ccgctggtcggggaggacgtgacggacctgttcatccacctgaccggctactcccaccac
tccgcctaccggcggctgctggtggcgccgcactccatgcgcagcgggctgctggccagg
atcgagcgggagatctcccacgcgcgggcgggccggcccgcgcgcatcaggatcaagacg
aactcgctggtggacgagccgatcatcgacgccctctaccgggcgtccagggcgggcgtc
ccggtggacctgtgggtccgcggcatctgcagcctccgtccaggaatccccgacctgtcc
gagaacatccgcgtacggtcggtcctggggcggttcctggagcactcccgggtgtacgag
ttcggcctgggccgccgtcccgaggtctggatcggcagcgccgacctcatgcgccgcaac
ctcgaccgccgcgtggaagccctggtcaaggtgacgtcgccgcagcacaaggcgtacctc
gtcgagctgatggacctggtcatggccgacggcacgaacgcgtggtggctgaactccgac
ggcacgtgggtccgccacccgggcgaggacccgcagagccacctcatcggcacccgccgc
tggaggaccgttgacgactga
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