Nitrosopumilus oxyclinae: C5F49_05960
Help
Entry
C5F49_05960 CDS
T06689
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
nox
Nitrosopumilus oxyclinae
Pathway
nox00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nox00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
C5F49_05960 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nox01007
]
C5F49_05960 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nox03016
]
C5F49_05960 (lysS)
Enzymes [BR:
nox01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
C5F49_05960 (lysS)
Amino acid related enzymes [BR:
nox01007
]
Aminoacyl-tRNA synthetase
Class I (A)
C5F49_05960 (lysS)
Transfer RNA biogenesis [BR:
nox03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
C5F49_05960 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
Anticodon_2
tRNA-synt_1g
PolyA_pol_RNAbd
tRNA-synt_1
Ribosomal_L30_N
Motif
Other DBs
NCBI-ProteinID:
QLH04910
UniProt:
A0A7D5M593
LinkDB
All DBs
Position
1027902..1029491
Genome browser
AA seq
529 aa
AA seq
DB search
MTEQEIIGKGTWIDKLASELLEREKELGRNTDLLRVESGLGASGIPHIGSLGDAVRAYGV
KLALENLGYKSELIAYSDDLDGLRKIPEGMQEFGLEEHIAKPVSLIPDPYGCHDSYGMHM
SSILLEGLDKVGIKYEFRRAVDTYKQGLLKDQIHTILQNSAKIGDKISELVGQEKYQKYL
PYFPVCANCNRLYTAEASEYIADEKKIKYTCHDTEIGSKMVKGCGHVGEADIGKDLGKLA
WKVEFAARWKAFDIRFEAYGKDIMDSVKVNDWVADEILGFPHPHHVKYEMFLDKGGKKIS
KSLGNVITAQKWLEFGSPKSILLLLYKRITGARELGFDDIPGLMNEYNELEDIYFGRIKV
DNQAKLIKNKGLYEYVNLLNPPKQSSTHVNYRLLIELAKIFKENRTERVMKKLLDYGVIK
NPEPEIEKLIELAGNYSNEFDEQEKTQVDLDDTAKKALKLLVEALEGNEELEDIQNTIYQ
IAKANDVQPKDFFKILYQIILGTSRGPKIGPFISDIGRKQVAKTLSEYV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaggaaattataggaaaaggaacttggattgacaaattagcttcagagtta
cttgaacgagaaaaagaactaggaaggaatacagatctactcagagttgaaagtggattg
ggagcttctggtattccacacataggaagcttaggagatgcagtaagagcatacggagtt
aaactggcattagaaaatttaggatacaaatcagaattaattgcatattcagatgatctt
gatggattaagaaaaattcctgaaggaatgcaagagtttggattagaagaacacattgca
aaaccagtatcattaattccggatccctatggatgtcacgattcctacgggatgcacatg
agcagcattctactagaaggattagacaaagtaggaataaaatatgaatttagaagagca
gttgacacttacaaacaaggattactaaaagatcaaattcatacaattctacaaaacagt
gcaaaaattggagataagatttcagaattagtaggacaagagaaatatcaaaaatatcta
ccgtattttccagtttgtgctaattgtaatcgcctctacactgccgaagcttcagaatac
attgcagatgaaaagaagataaaatacacttgccacgatactgaaattggctcaaaaatg
gtcaaagggtgtggccatgtgggggaggcagatattggaaaagatcttggtaaattagct
tggaaagtagaatttgctgcaagatggaaagcatttgacattagatttgaagcatatggg
aaagacatcatggattcagttaaagtaaatgattgggttgcagatgaaattttaggattt
ccacatcctcatcatgtaaaatatgagatgtttttagacaagggtggaaaaaagatttca
aaatctctagggaatgtaattaccgcacagaaatggctagaatttggcagcccaaaatca
attctattgttactttacaagagaattacaggtgcaagagaattaggatttgatgacatt
ccaggattgatgaatgagtataatgaattagaagacatctactttggacgaatcaaagta
gataaccaagcaaagttgataaaaaataaaggattgtatgaatatgtaaatctcctcaac
ccgccaaaacaatcaagcacgcatgttaactatagattattaattgaattagcaaaaatc
ttcaaagaaaatagaactgagcgagtaatgaaaaaattgttagattatggtgtaattaaa
aatccagaacctgaaattgaaaaactcattgaacttgcaggaaactattcaaatgaattt
gatgaacaagaaaaaactcaggtggatttagatgatactgctaaaaaggcattaaaatta
cttgtagaagcattagagggcaatgaagaattagaagatattcaaaatacaatttatcaa
attgcaaaagcaaatgatgttcaaccaaaagatttctttaaaatattatatcaaatcata
cttggaacctcaagaggaccaaaaataggaccattcatttcagacattggacgaaagcaa
gtagcaaaaacactttcagagtatgtttaa
DBGET
integrated database retrieval system
