Nothoprocta perdicaria (Chilean tinamou): 112943042
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Entry
112943042 CDS
T07556
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112943042 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112943042 (POLR1A)
Enzymes [BR:
npd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112943042 (POLR1A)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112943042 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
TssR_VWA
zf-RING_4
SQHop_cyclase_C
Motif
Other DBs
NCBI-GeneID:
112943042
NCBI-ProteinID:
XP_025889915
Ensembl:
ENSNPEG00000001008
LinkDB
All DBs
Position
Unknown
AA seq
1712 aa
AA seq
DB search
MRPPKVVPWRRLVRVSFGMYSADEIRKLSVKAITNPQYLDSVGNPAVNGLYDLALGPPDS
KEACATCMQTFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLERGLLHAVHDLEVILNRFLEQNADATGLEIEEELNHHVHEILQNNQLGDQCSN
VKNVCECXHKLISQFWKAHMTSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYQKSGEEGS
LEEPAVIDETQLGKRGYLTPMTAKEHILSLWRNEGFFLRYLFPGMDNHGSTGFSPDLFFL
DLLVVPPSRYRPINRLGDRMFTNGQTVNLQAVMKDAQMIRKLLVFMAKEQCQPIKITENE
IQTETSEPEEPVDRSVLSMISGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIR
QLLEKKEGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVK
ELRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVC
RHIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLASTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRSCFFTREQYMELVYR
GLTDKKGRIKVFPPAIMKPQKLWTGKQVVSTLLINIIPENHIPLNLTGKAKIDGRAWMKG
PAKRCLETNLDSMCESQVIIRHGELLCGVLDKAHFGSSAYGLVHCCYEIYGGETSGKVLT
CLGRLFTAYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSTHCGIEAVRAAFNLPETASC
DEIRGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNQVNKVCMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGI
RPSEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLY
GEDGLDIPKTQFLQPKQFPFIAENYEVIQRTNHLDEALAKMESHQANRQFKAIKKWRARH
QTSVQREGGFLMYSQKKMASVKAQIPAGDSKNGRDPATLQLLKMWYELDEKKRRKYQKKT
NKCPDPSLSVWRPDTYFASVSETFENGVDDYIKKWESENQGCYVQPAFSSDRLKDLLYLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANI
KTPMMSVPVLNTKKAHKKVKQLKKRLTRVCLAEVLQKIEMEESLHMREEQNKHRLYKIKF
LFLPYECYREEKCVKPRDILYFMETRFFKILLETIKKKSAKLESFTEVSARKATRKDLDG
DHDQVLNNQEAPEDEEKIVDAEADEGDGDATEAKRRKKQEEEVDYESEEENGDEHAGENR
EEEEAESEKEEERPQSAEGGDENEAEGDDSQHLSFMSQSKKERDRIVKSAALRINAVLSS
HPSIQDYTFDTEKELWCEVSLTLPLMKVYFDLTSLLATLARNTVIHEIKGITRCLLNEDT
NKEGEKELVLHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGVESALRVIIKEIKDV
FAVYGIVVDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMG
ACDELRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaggtggtgccgtggcggcggctggtccgggtctccttcggcatgtac
tcggccgacgagatcaggaaactgagtgtaaaagccataacaaatccccagtatttggac
agcgtggggaatccagccgttaatggactgtatgacttggctttgggacctccggactcc
aaagaagcgtgtgcaacttgcatgcagaccttcagcaactgcccgggtcactttggccac
atagagctacccctcactgtctataaccctctgtttttcgataaattataccttctaatt
cgaggytcttgtttaaattgccacatgctgacatgtactcgagccgtggttcacctgctg
ctaagtcaactgaaggttctggagagagggttgcttcatgcagtccatgatcttgaagtc
attctgaacaggtttttagagcaaaatgcagatgcaacaggcctagaaattgaagaagag
ttaaatcaccacgttcatgaaatactgcaaaataatcaactaggagatcaatgttcaaat
gtaaaaaatgtatgtgaatgcargcataagctgatatcacaattctggaaagcacatatg
acttcaaaaaagtgcccaaattgcaagtctaggagatcactagtgcgaaaagagcataat
agcaagctgacagtaacctatccttccacagtgtatcagaagtcaggagaagaaggcagc
ctagaagagccagcagttattgatgaaacccagttagggaagagaggatatctaacacca
atgactgccaaagagcacatcctgtctctgtggaggaatgaaggtttctttttgcgttat
ctcttccctggcatggataatcatgggagtacaggattcagtccagatctgttcttttta
gatcttcttgttgttccaccttcaaggtaccgtcccataaatcgcctcggagatcggatg
ttcacaaatggacagactgtgaacctgcaggctgtcatgaaagatgcacagatgatacgg
aagctcttggttttcatggctaaagaacaatgtcagccaataaaaataacagaaaatgaa
atccaaacagagacaagtgagcctgaggaacctgtggaccgttctgtcctgtccatgatt
tcggggcagaccatcgcagataagctgtacaatgcttggattcgtcttcagagccacgtc
aacattgtgtttgatagcgacatggacaagttaatgacagaaaaataccctggtattcgt
cagctgttggagaaaaaggaaggtctgtttcgcaagcatatgatgggaaaacgtgtggat
tacgctgctcgatccgtcatttgccctgatatgtacattggtacaaatgagattggcatt
cccatggtatttgctaccaaactgacttaccctcagccagtcactccctggaatgtcaag
gagctgagacaggctgtcataaatggcccaaaggttcatcctggggcctccatggtcatt
aatgaagatgggtctcgtacagtgttgagtgccagtagcctgacccagagggaagccata
gctaagcagctccttactccttcctcaggtgctccccagtcaggactgaagattgtgtgt
cgccacattaaaaayggagacgtccttttgctgaaccgccagcccaccctgcacagaccc
tccatccaggcccaccgggcccggatcctgcccggagagaaggtgctgaggctgcactac
gccaactgcaaggcctacaacgccgacttcgacggcgacgagatgaacgcccatttcccc
cagagcgagctgggcagagccgaggcctacaccctggcctccacggacgagcagtacctg
gtgccaaaggatggcaaaccgcttcccggcttgatccaagatcacatgatttctggtgts
agcatgacaatccggagctgctttttcacacgggagcaatatatggagcttgtttaccga
ggcctgacagacaagaaggggagaattaaagtctttccacctgccattatgaagccacag
aaattatggacaggaaagcaggttgtttctacattgctaataaacattattccagaaaac
cacatcccactgaatttgactgggaaagctaagattgacggaagagcttggatgaaaggg
cctgcaaaaagatgtctagaaactaatcttgattcaatgtgtgaatctcaggttattatt
agacatggagagttgctgtgtggggtcttggacaaagctcacttcggcagctctgcytat
ggcctcgtccactgttgctacgaaatctatgggggtgaaacgagtgggaaggtgctaacg
tgtctgggacgcctctttactgcttatctgcagctctacaggggatttactatggggatt
gaagatatcttggttaaacctgaagcagaccacaaaagacaaaaaattattgaaaagtca
actcattgcggtattgaagctgttagagctgcttttaatttgccagaaacagcatcatgt
gatgagatccgagggaaatggcaggatgcccatctctgcaaagaccagagggattttaac
atggttgatctgaaattcaaggaggaagtaaacaattacaacaatcaagttaacaaggtt
tgtatgccccttggtctccataggagctttccagagaacaatttgcagttgatggtccag
tcaggagccaaaggatctactgtaaatacgatgcagatttcctgtttgctgggccagatt
gagctggaaggtcgaaggcccccactgatggcatctggcaaatccctgccatgtttccag
ccttatgacttctcccccagctcaggaggatttgtgactggcaggtttctcactgggatc
aggccttctgaattcttctttcactgcatggctggcagggaagggcttgtggatacagct
gtcaaaaccagccgatctggataccttcaaaggtgtatcataaaacatctggaagggctg
gtggttcagtatgacctcactgtacgtgacagcgatggcagcgtggtgcagtttttgtat
ggagaagatgggcttgatatccccaaaactcagttcttgcaacccaagcagttccctttc
attgctgaaaattatgaggtaatccaaagaacaaaccatctggatgaagctttagcaaag
atggagtctcaccaagctaaccgacagttcaaagccatcaaaaagtggcgagccaggcac
caaacctctgtgcaaagagaaggaggttttctgatgtattcccagaagaaaatggcaagt
gtaaaagcacagattcctgccggagacagcaaaaatggaagagatcctgctactttacag
ttattaaagatgtggtatgaactagatgagaagaaacgaagaaaataccagaagaagaca
aataagtgtcctgacccaagcctttctgtctggcgtccagatacctactttgcatctgtt
tcagaaacatttgaaaatggagtcgacgattacatcaagaaatgggaatctgagaaccaa
gggtgttacgtgcaaccagcgttttcttctgatagattaaaggatttgttgtatttaaag
tggcaacgatccctgtgtgacccaggagaagccgtgggtctccttgcagctcagagcatt
ggggaaccttccacgcagatgactttgaacacgttccactttgctggcagaggtgaaatg
aacgtcacgttgggcattccraggttgcgggagatattgatggtagccagtgcaaatatt
aaaacgccaatgatgagtgtccctgtgttaaataccaagaaagcccacaaaaaggtgaaa
cagcttaagaagaggctgacaagagtgtgcttagctgaggtcttgcagaaaattgagatg
gaggaatctctgcatatgagggaggagcagaacaaacatcgcctctacaaaatcaaattc
cttttcttgccctatgaatgttaccgagaagagaaatgtgtgaagcccagggacatcttg
tacttcatggaaacaaggttctttaaaatcttactggaaacaattaaaaagaagagtgca
aagctggaatcttttactgaagttagtgcccggaaagcaactcggaaggatttagatggt
gaccatgatcaggtgttgaataatcaggaagctccagaagatgaagaaaagattgttgat
gcagaagctgatgaaggggatggtgatgctacagaggcaaagcggaggaagaaacaggaa
gaggaggttgattatgagagtgaagaagagaatggggatgaacatgctggtgagaaccga
gaagaggaagaggcagaatcggagaaagaagaagaaaggcctcaaagtgctgaaggagga
gatgaaaatgaagcagagggtgatgattctcaacatctttcctttatgtctcagagcaag
aaggagagggatcgaatagttaaatcagcagctttacgaataaatgctgtcctgagcagc
cacccatcaatacaggattacacatttgatacagaaaaagaactttggtgtgaggtttcg
ctgacgctccctttgatgaaggtgtacttcgacctcacctccttgctggcgacgctggca
cgaaacacagtcatccatgagataaaggggatcacacgatgcttgctgaatgaagacacc
aataaggaaggagagaaggagctggttctccatactgaagggataaaccttgcagaactg
ttcagatactctgatattttggacctgaacagactttattccaatgatattcatgccatg
gctaagaactatggtgttgaatcagccctgagggttattataaaggaaataaaagatgtg
tttgctgtatatggtattgtggtagaccctcggcacctttcactggtggcagattatatg
tgttttgaaggagtttataaaccactgaatcgttttggaattcagtccaactcttcccct
ctgcagcagatgacgtttgaaaccagctacaagttcttgaaggaagcaacaatgatgggc
gcctgtgatgaactgaggtctccttcggcatgcctagtggttggaaaagttgttaaagga
gggactggtttgtttgacctcaaacaacctcttacgtaa
DBGET
integrated database retrieval system
