Nothoprocta perdicaria (Chilean tinamou): 112949341
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Entry
112949341 CDS
T07556
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
112949341 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npd03021
]
112949341 (POLR1B)
Enzymes [BR:
npd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
112949341 (POLR1B)
Transcription machinery [BR:
npd03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
112949341 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
112949341
NCBI-ProteinID:
XP_025897517
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MVAISISPPMVPKGTICQDMKVYPAECRGLRSTYRGKITADICWSVNDIPQGTIKQPLGY
IPIMVKSKLCNLYNFSAQELIQHHEEEEEMGGYFIINGLEKVVRMLIMPRRNFPLAMTRH
KWKNRGPGFTEYGVMLHCVKDEHTAINMNLHYLENGCVMLNFIFQKELFFLPLGFALKAL
VNFSDYQIFEELVKEKEDDTFYVNCVAEMLRAVLDAGCTTQQQVLNYLGKSFRVKLNLPE
WYSNEQAADFILNKCICIHLTNRTEKFYLLCMMTRKLHAFAKGECMEDNPDSLMNQEVLT
PGQLFLMFLKERLESWLHSVRFVLEKRTEKADISINTDNLMKAFGLAADFTKPFEYLLAT
GNLRSKTGLGMLQDTGLCVVGDKLNFVRYLSHFRCIHRGSAFSQMRTTTVRKLLPESWGF
LCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVADLPLLLCSLGVTPIDGTPGKPYAECYRV
VLDGSVVGWVEQELAPQIAETLRRFKITQEKRFPARAEVVLIPKTGKPSLYPGLFIFTTP
CRMVRPVRNLSFGRKEWIGTLEQIFMNVAAMESEVVPGVTTHQELFPHSILSVVANLIPF
SDHNQSPRNMYQCQMGKQTMGFPVYNYRDRSDNKLYHLHTPQSPLVRPSMYDYYDMDSYP
IGTNSIVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKVESIDLSLKASRGGDNLVFGV
KAGDGNLAEKLDADGLPYVGSILQPGDPFYSFMNISTGEAFTVYYQNKEIGIVDNIRVCS
NDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFTENGMVPDILFN
PHGFPSRMTIGMLIESMAGKAAALHGVCYDATPFTFTEKNAALKYFGETLQGAGYNFFGT
EKMYSGVSGLELEVDIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPVKGRNVEGGIR
FGEMERDALLAHGTSFLLQDRLFNCSDGXVAYVCASCGSMTSPVLEQPPPSSSVGSSSRR
YSCSVCGEADGIEVVPVPHVFRYFVAELAAMNIKTTLNVE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatctccatctctcccccaatggtgcccaaggggaccatctgccaggacatg
aaggtctacccggcggagtgcaggggccttcggagcacgtatcggggcaaaataaccgct
gatatctgctggtcagtgaatgacattccacaagggaccattaaacagccgctggggtat
attccaatcatggtgaagtctaaattgtgcaacctctataatttttctgctcaagagctc
atccagcaccatgaggaagaagaagaaatgggaggctactttataattaatggcttagaa
aaagttgttcgaatgttgattatgcccaggcggaatttccctcttgccatgacaagacac
aaatggaaaaacagaggccctggtttcacagagtacggagtaatgttgcactgtgttaag
gatgagcacacggcaataaatatgaaccttcactacttggaaaatggttgtgtgatgctg
aacttcatttttcagaaggagttgtttttcctgcctttggggtttgctctgaaggcacta
gttaatttctcagactaccagatatttgaagagctggtcaaagagaaggaagacgacacc
ttttatgtgaactgcgttgctgaaatgctgagagcagttttggatgcaggctgcactacc
caacaacaagtcctcaactacctgggaaagagcttccgagtaaaactgaaccttcctgag
tggtacagcaacgagcaggccgccgacttcattttgaacaagtgcatctgcatacacttg
acaaatcgaactgaaaaattctacctgctttgtatgatgacccgcaagctgcacgcgttt
gccaaaggggagtgcatggaggataacccagacagcctgatgaatcaagaagtgcttaca
ccaggacagctcttccttatgttcttaaaggagaggctcgaaagctggttgcattctgtg
aggtttgttttggagaagagaacagaaaaggcagatatcagtataaatacagacaacttg
atgaaggcttttggcctggcagcagactttaccaagccctttgagtacctgcttgcgact
ggtaacctgcgctctaaaactggcttgggcatgctgcaggacaccggtctgtgtgtggta
ggagacaagctgaattttgttcgctacctgtctcacttccgctgcatacacaggggctca
gccttttcccagatgaggaccacgactgtgcgcaagctgctgcccgagtcctggggcttc
ctgtgccctgtggacaccccagatggagagccctgtggtctcatgaaccacatgacagct
gtgtgtgaaatagtcacggagatggtgcctgtggcagaccttccacttctgctgtgttcc
ctaggtgtcactcccatcgatggcactccaggcaagccctatgccgagtgttaccgagtg
gtgttggacggctccgtggtgggctgggtggagcaggagctggcgccgcagattgcagaa
accctccggcggttcaagataacacaagagaagagatttcctgcacgggcggaagtggtt
cttatcccaaagacaggaaaacctagcttgtaccctgggttgttcattttcactactcct
tgccggatggtgcggccggtcagaaacctgtcctttggaaggaaggaatggatcggcacc
ctggaacagatcttcatgaatgttgcagccatggagtcggaggtcgtgcctggcgtgacc
actcaccaggagctcttccctcacagcatcctgagtgtggtggccaacctcatccccttc
tccgaccacaaccaaagtcctcggaacatgtaccagtgccagatggggaagcaaaccatg
ggatttccagtgtataactacagggaccgctcagataacaagctgtaccaccttcacacc
ccccagagccccctggtgaggcccagcatgtatgattactatgacatggacagctatccg
attggaaccaactccatcgtggccgtcatctcctacagtggctacgacatggaagatgct
atgattgtgaacaaatcttcctgggagagagggttcgcctatggaagtgttatcaaggtg
gagagcattgacctgtcccttaaagccagcaggggaggcgataacttagtctttggcgtc
aaggctggtgatgggaacctcgccgagaagctggatgctgacgggctgccttacgttggc
tccatcctgcagccgggggaccctttctacagcttcatgaacatcagcacgggggaagcc
ttcactgtgtactaccagaacaaggaaattggcatcgtagacaacatcagggtgtgcagt
aatgaccgtggcaccgggaagttcaagaaagcttgcatcaccgtgagagtcccccgaaat
cccaccataggagacaagtttgccagccgccacgggcagaaaggcatcctgagccagctg
tggccagtggaggacatgcccttcacggagaacgggatggttccggacatcctcttcaac
cctcacggctttccctcccgtatgaccatcgggatgttaattgagagcatggcgggcaag
gcggcagcgctgcacggcgtctgctacgacgccacccccttcaccttcacagagaagaac
gcggctctgaaatacttyggggagaccttgcagggtgcggggtacaatttcttcgggacc
gagaagatgtacagcggcgtgagcggcctggagctggaggtggacatcttcgtgggagtc
gtgtactaccagcgcctgcgccacatggtctcagacaagttccaggtgaggacgacgggc
ccccgagacagcgtcaccaaccagcccgtcaaagggaggaacgtggaaggcggcattcgc
tttggcgagatggagcgcgacgccctgctcgcccacggcacctccttcttgctgcaggac
cgtctcttcaactgctccgacggckccgtagcctacgtgtgcgcgagctgcgggagcatg
acgtcccccgtgctcgagcagccgccgccttcctcctccgtcggcagcagcagcaggcgc
tactcgtgctccgtgtgcggcgaggccgacggcatcgaggttgtccccgtcccccacgtc
ttccgctacttcgtggccgagctggcagccatgaacataaagacgacgctcaacgtggag
tag
DBGET
integrated database retrieval system
