Nothoprocta perdicaria (Chilean tinamou): 112955828
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Entry
112955828 CDS
T07556
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
npd
Nothoprocta perdicaria (Chilean tinamou)
Pathway
npd04020
Calcium signaling pathway
npd04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
112955828 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112955828 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npd04040
]
112955828 (GRIN1)
Ion channels [BR:
npd04040
]
Ligand-gated channels
Glutamate (ionotropic)
112955828 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
112955828
NCBI-ProteinID:
XP_025904998
Ensembl:
ENSNPEG00000005262
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISGQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESFSAPAAECGRSPRLAAPAPWRLVL
PACANQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPW
SQDSPGKLPSHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcgtcgtccttcgcgcgcgcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggccgtgaaccaggccaacaagcggcacggcacctggaagctccagctc
aatgccacctccgtcacgcacaagcccaacgccatccagatggctctctccgtttgcgag
gacctcatctccggccaggtctatgcaatattagttagtcaccctcctgctccaaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcaca
gtcccaccgtattctcaccaggccaatgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagaatccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagttcttcagtttgaccct
ggaaccaaaaatgtgacatccctgctgcttgaagctaaggagctggaggctcgagtcatc
atcctttctgccagtgaggacgatgcggccacggtgtacagatcagcagccatgctcaac
atgacgggctccggctacgtgtggctggtgggggaacgggagatatcaggcaacgcgctg
cgctatgccccggatggcgtgattggtttgcagctcatcaatgggaagaacgagtcagcc
cacatcagtgatgctgttgctgtggtggcccaggccgtgcatgacttgtttgagaaggag
aatatcacagacccaccacgtggctgtgtgggcaacaccaacatctggaagacaggccct
cttttcaagagggtgttgatgtcctccaagtattcagagggtgtcactggacgggtggaa
ttcaatgaagatggggacaggaagtttgccaattacagcatcatgaacctgcagaaccgg
aaactggtgcaagtcgggatttacaacggcagccacgtcttgaccaatgatcggaagatc
atctggccaggaggggaaacagagaaacctcaaggctatcagatgtcaacaaaattgaag
atcgtgaccatccatcaagagccctttgtgtatgtgaagcccacacaagcagatgggaca
tgcagggaggagttcaccatcaatggagaccctgtgaaaaaggtcttttgcactgggccc
aacgagaccatcccaggccgccccactgtggcactgtgctgctacggcttctgcatcgac
ctcctcatccgcctggcaggggtcatgaatttcacctacgaggttcacctggtggctgat
ggtaaatttggtacccaagaacgggttaacaacagcaataaaaaggagtggaacgggatg
atgggggagcttctgagcggccaggcagatatgattgtggctcctctcaccatcaacaat
gagcgggcgcagtacattgaattttccaagcccttcaagtaccagggcctcaccatcctt
gtgaagaaggaaatcccccgcagcaccttggactccttcatgcagccgttccaaagcacc
ctctggctgctggtggggctgtctgtgcacgtggtggcagtgatgttatacctcttggat
cgcttcagcccatttggccggtttaaagtgaacagcgaggaggaagaggaggatgccctg
actctctcatctgccatgtggttctcctggggagttctgctgaactctgggattggagaa
ggtgctcctcggagtttttctgcccgtattcttggcatggtgtgggctggcttcgctatg
atcattgtggcttcatacactgccaacctggctgccttcttggtgttagaccggcctgag
gagagaattacaggcattaacgaccccaggctgcgcaacccttctgataaattcatctat
gctacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaagcacaactatgagagtgcggctgaagccatccaggccgtg
agggacaacaagctccatgctttcatctgggactcagcagtgcttgagtttgaagcctcc
cagaagtgtgacctggtgacgacgggggagcttttcttccgctctggctttgggattggg
atgcgcaaagacagtccatggaagcagaacgtctccctggctatcctcaagtcccatgag
aatggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcgaaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggcaaggtcacactcattggcacgaaagcaattggggaggaatcgttctcagcgccc
gccgcagagtgcggccggtctcctcggctcgctgcccctgcaccatggcggctggtgctc
ccagcctgcgctaaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaa
gccacttttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctcc
aaggatacgccctgcagaatggtccctcaggagtgccagagagacaggctggcaccatgg
agccaagacagccctgggaagctaccatcccactctgaacgtcctagcgcccaccatcac
ccgagctgcacagcctctccgcggcacatcatccccaccgccccaggaggagatgcatgt
gttccccataggcagctcctgcaactcgaatag
DBGET
integrated database retrieval system
