Novosphingobium pentaromativorans: JI59_06940 Help Entry JI59_06940        CDS       T03399                                  Symbol putA Name (GenBank) transcriptional regulator   KO K13821   RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] Organism npn  Novosphingobium pentaromativorans Pathway npn00250   Alanine, aspartate and glutamate metabolism npn00330   Arginine and proline metabolism npn01100   Metabolic pathways npn01110   Biosynthesis of secondary metabolites Module npn_M00970   Proline degradation, proline => glutamate Brite KEGG Orthology (KO) [BR:npn00001]  09100 Metabolism   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     JI59_06940 (putA)    00330 Arginine and proline metabolism     JI59_06940 (putA)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:npn03000]     JI59_06940 (putA) Enzymes [BR:npn01000]  1. Oxidoreductases   1.2  Acting on the aldehyde or oxo group of donors    1.2.1  With NAD+ or NADP+ as acceptor     1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase      JI59_06940 (putA)   1.5  Acting on the CH-NH group of donors    1.5.5  With a quinone or similar compound as acceptor     1.5.5.2  proline dehydrogenase      JI59_06940 (putA) Transcription factors [BR:npn03000]  Prokaryotic type   Ribbon-helix-helix    Other families     JI59_06940 (putA) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pro_dh Aldedh Pro_dh-DNA_bdg PRODH Motif Other DBs NCBI-ProteinID:  AIT79540 LinkDB All DBs Position complement(1443434..1447045) Genome browser AA seq 1203 aa AA seqDB search MTQIEPFSDFAPPVRPASALRETITAAYRRDEAECMAPLLGAASLNDKLRSDIRDTTSRL VIALRSGPRGSGVEGLVQEYSLSSQEGVALMCLAEALLRIPDDDTRDALIRDKIAEGNWS GHLGNGKSLFVNAATWGLVVTGKLVGSVDDKGLSAALTRLIARAGEPVIRRGVDLAMRMM GEQFVTGETIEEAVKRARELEARGFRYSYDMLGEAATTAADASRYYADYENAIHAIGQAA GGKGVYEGPGISIKLSALHPRYSRAQAGRVMDELLPRVKALAVLSKRHDIGFNIDAEEAD RLELSLDLLESLALDPELTGWNGLGFVVQAYGKRCPAVIDWIVDLARRAKRRIMVRLVKG AYWDAEIKRAQVDGLEDFPVYTRKVHTDVAYIACARKLLAAPDAVFPQFATHNAQSLATI YHLAGPDFSVGQYEFQCLHGMGEPLYKQVVGKDNLDRPCRIYAPVGTHETLLAYLVRRLL ENGANSSFVNRIADPSVSVSELAADPVDVVRAMPEPGARHPLIALPRDLYPHRRNSDGID LSSEAELAALAGQLRKSASIDWYAMPEYGQGEERPVLNPADHRDVVGCVFEAAPQVSEMA VSRAALSRWKYVPVAERAAMLETAADVLQDRIGVLMGLVMREAGKSAANAIAEVREAIDF LRYYARQARDTLGEDQAPLGPVVCISPWNFPLAIFIGQVTAALVSGNPVLAKPAEETPLI AAEAVRILHEAGVPRDALQLVPGDGKVGAALVAASKVAAVMFTGSIEVARLIQRQLSSRL SPAGKPIPLIAETGGQNAMIVDSSALAEQVVGDVIASAFDSAGQRCSALRVLCLQEDIAD RTLTMLKGALAELRIGNTQQLAVDIGPVITAEARDNINAHIEAMRKRGHKVEQVAVPADE TAHGTFVAPTIIEIDSIADLGREVFGPVLHVLRFRRADLGKLVDAINATGYGLTFGLHTR LDGTVAQVASRAKAGNLYVNRNIIGAIVGVQPFGGRGLSGTGPKAGGPLYQGRLVTVPPQ VLPPSGIPFDALGAFIEWLERQGETAAADRAHAMGAASALGTELALPGPVGERNLYALHP RGRILLFPKTREGLFAQIAAALATGNRAVVEGMALPADLPRQVASFFESDSDESFGAVLV EGGSEDVRKACEAVARRPGAIVTVHASLPGKDLEWPLDFLLEEVSISINTTAAGGNASLM MIG NT seq 3612 nt NT seq  +upstreamnt  +downstreamnt atgacccagatcgagcccttttccgacttcgccccgcccgtccgccccgcttccgcgctg cgcgagacgataacggccgcctatcgccgggacgaagccgagtgcatggctcctctgctc ggtgcggcgagcctgaacgacaagctgcgttcggatatccgcgataccaccagccgtctc gtgattgcactgcgcagcggtcccaggggcagcggcgtcgaagggctcgtgcaggaatac tcgctctccagccaggaaggcgtcgcgctcatgtgccttgcagaggcgctgctgcgtatc cccgatgacgatacccgcgacgcgctgatccgcgacaagatcgccgagggcaactggagc ggccacctcggcaatggcaagtcgcttttcgtcaatgccgcgacctgggggctggtggtg accggcaagcttgtcggcagcgtcgatgacaagggtctgtccgctgcactcacccggctg atcgcgcgtgccggtgagccggtcatccgccgcggcgtcgatctggcgatgcgcatgatg ggtgagcagttcgtcaccggcgagactatcgaggaagccgtgaagcgagcacgcgagctg gaagccaggggcttccgctacagctacgacatgctcggcgaagctgcgacgacggcggcc gatgcctctcgctactatgcggactacgagaacgctatccacgccatcggtcaggccgca ggtggcaagggcgtctatgaaggccccggcatttcgatcaagctctccgcgttacatccg cgctacagtcgggcgcaggcagggcgggtgatggacgaactgctgccgcgggtgaaggcg ctggcggtactttcgaagcggcatgacattggcttcaacatcgatgccgaggaagccgac cggctcgagctgtcgctggacctgctcgagagccttgcgctcgatcccgaacttactggc tggaacggccttggcttcgtggtccaggcctatggcaagcgctgtcccgccgtcatcgac tggatcgtcgatcttgcccgccgggcgaagcggcggatcatggtccgcctcgtcaagggc gcctattgggatgcggagatcaagcgcgctcaggtcgacgggctggaggacttcccggtc tatacccgcaaggtccataccgacgttgcctacatcgcctgcgcgcgcaagctgctggcc gcgccggacgcggtgttcccccagttcgcgacccacaatgcgcagtcgctggcgacgatc taccaccttgcggggccggatttcagcgtgggccaatacgaattccagtgcctgcatggc atgggcgaaccgctttacaagcaggtcgtcggcaaggataacctcgatcggccctgccgc atctatgcgccggtcgggactcacgagacgctgctggcctatcttgtgcggcgcctgctg gagaacggcgcgaattcgtctttcgtgaaccgcatcgcagatccgtcggtgtccgtttcg gaactggccgccgacccggtcgacgtcgtgcgcgcgatgcccgagccgggtgcgcgacat ccgctgatcgccctgccgcgcgacctctatcctcatcgccgcaattcggacggtatcgac ctgtccagcgaagccgagctggcggccctggccggtcaattgcgcaaatccgcaagtatc gattggtatgccatgcccgaatatgggcagggagaggagcgcccggtcctgaacccggcc gatcatcgtgacgtcgtgggctgcgtcttcgaagccgcgccccaagtgtcggaaatggca gtctcacgcgcggcgctcagccgctggaagtatgtgccggtagccgagcgcgcggctatg ctggaaaccgccgccgacgtccttcaggaccggatcggggtgctcatgggtctcgttatg cgcgaggcgggcaagtcggccgcaaatgccattgccgaagtgcgcgaggcgatcgatttc ctgcgttactacgccaggcaggcccgcgatacgctgggcgaggatcaggcgccgcttggc cctgtggtctgcatcagcccgtggaacttccctctcgccatcttcatcgggcaggtcacc gccgcactggtctcgggcaacccggtgctggccaaacccgccgaggaaaccccgctgatt gctgccgaagccgtgcgtatcctgcacgaggccggcgttcccagggatgcgctccaactc gttccgggagacggcaaggtcggcgcggcgctggtggccgcctccaaggttgccgcggtg atgttcaccgggtccatcgaagtggcgcgcctgatccagcggcagctttcctcgcggttg tcgccggccggcaagccgatcccgctgatcgccgaaaccggtggacagaacgcaatgatc gtcgattcctcggcactggccgaacaggtcgtgggcgacgtcatcgcttcggccttcgac agtgcgggccagcgctgctcggcattgcgcgtgctgtgcctgcaggaagacatcgccgac cgcaccctaactatgctcaagggggcgctggccgaattgcgcatcggcaacacgcagcaa ctggccgtcgacatcggcccggtcatcacggccgaggcccgggacaacatcaacgcgcac atcgaagcgatgcgcaagcgcgggcacaaggtcgagcaggtcgcggtccccgctgacgag acagcccatggcactttcgtggccccgacgatcatcgagatcgacagcattgcggatctc ggccgcgaggtcttcggcccggtcctgcacgtgctgcgtttccgcagggcggacctcggc aagctggtcgatgcgatcaacgctaccggctacggcctgactttcggcctgcatacgcga ctggacggtaccgtggcacaagttgcttcgcgcgcgaaggcaggcaacctctacgtcaat cgcaacatcatcggtgccatcgtcggggtgcagcctttcggtgggcgcggcctttcgggg accggccccaaggccggcgggccgctctaccaggggcggttggtcacggttccgccgcag gtcctcccgccctcgggaatacctttcgatgcgctcggtgcttttatcgagtggctggag aggcaaggcgagactgcggccgccgatcgcgcccacgcgatgggtgcggccagcgcgctc ggcaccgagcttgcgctgccgggcccggtcggagaacgtaacctctatgcgctgcatccg cgcggccggatcctgctgttcccgaagacgcgcgaagggctcttcgcacagatcgccgca gcactggcaacgggcaatcgcgcggtggtggaaggcatggcgcttcccgccgacttgccg cgacaagtggcgtccttcttcgaaagcgactcggacgaatcgttcggtgccgtgcttgtc gaagggggtagcgaggacgttcgcaaggcttgcgaggcagtcgcaagacgccccggcgcg atcgtcacggtccacgcttctctgccgggcaaggatctggagtggccgctcgattttctg ctggaggaagtctccatctctatcaacacgaccgcggcaggcggcaatgccagcttgatg atgatcggttaa

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