Novosphingobium pentaromativorans: JI59_12230
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Entry
JI59_12230 CDS
T03399
Name
(GenBank) protocatechuate 3,4-dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00362
Benzoate degradation
npn00624
Polycyclic aromatic hydrocarbon degradation
npn00627
Aminobenzoate degradation
npn01100
Metabolic pathways
npn01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JI59_12230
00627 Aminobenzoate degradation
JI59_12230
00624 Polycyclic aromatic hydrocarbon degradation
JI59_12230
Enzymes [BR:
npn01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
JI59_12230
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
AIT80490
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Position
complement(2522807..2523640)
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AA seq
277 aa
AA seq
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MAEIVGGFLMPHNPALSGMLKGLADQAQEDTVFKAFEHIAARLVELRADTVIIISDDHYT
NFGPHCIPSCLIAVGDLDGPIEDWIPLEKGMIPNNEPLARHILAQGGIDRIDWSFAKALT
VEHAIAIPYEFAVKANPGLKTIPVYLNCTQRPFVSNQRAYEIGESIRRAVESWPGNERVV
IFGTGGMSHWVGCPGMGHVNAAFDLRMLDLFVKGDVDALLAISDEEILRESGNGGMEIKN
WYCALGALPQAKGEIIAYEAMEAWLTGMGFAELKNAA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatagtgggcggtttcctgatgccgcataacccggcgctttcgggtatgctg
aagggcttggcggaccaggcgcaggaagacaccgtattcaaggcgttcgagcacatcgca
gcgcgcctggtcgagcttcgggccgataccgtcatcatcatcagcgatgaccattacacc
aatttcgggccgcactgcatcccgagctgcctgatcgcggtcggcgacctcgacgggccg
atcgaggactggatcccgctcgaaaagggcatgatcccgaacaacgagccattggcccgg
cacatcctcgcacaaggtggcatcgaccggatcgactggtccttcgccaaggcactgacc
gtcgagcacgctatcgccattccttatgaattcgcagtcaaggccaaccccgggctgaag
acgattcccgtctatctcaattgtacccagcggccgttcgtgtcgaaccagcgcgcctat
gagatcggggagagcatccgccgcgcggtggaaagctggccgggcaacgaacgggttgtc
atcttcggcacgggcggcatgagccactgggttggctgtccgggcatgggccatgtcaat
gccgccttcgatcttcgcatgctcgatctgttcgttaagggcgatgtcgatgccttgctg
gccatcagcgacgaggaaatcctgcgagagagcggcaacgggggcatggaaatcaagaac
tggtactgcgcactcggcgccctgccccaggcgaagggcgagatcatcgcttatgaggcg
atggaggcctggctgacgggcatgggcttcgccgagttgaaaaacgcggcgtaa
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