Novosphingobium pentaromativorans: JI59_15545
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Entry
JI59_15545 CDS
T03399
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn00020
Citrate cycle (TCA cycle)
npn00785
Lipoic acid metabolism
npn01100
Metabolic pathways
npn01110
Biosynthesis of secondary metabolites
npn01120
Microbial metabolism in diverse environments
npn01200
Carbon metabolism
npn01210
2-Oxocarboxylic acid metabolism
Module
npn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
npn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JI59_15545 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JI59_15545 (sucA)
Enzymes [BR:
npn01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
JI59_15545 (sucA)
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
Motif
Other DBs
NCBI-ProteinID:
AIT81094
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Position
complement(3222999..3225851)
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AA seq
950 aa
AA seq
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MGNENLDFTPDLGMDEPQPGPSWQRSNWPRVGAEFEDDLTQGLDPTALKVQIEKAAAKGG
KKVDQASLDQAAADAIRAMMLIRTYRVRGHLAADLDPLGLNQRKLPQDLTPEYHGFTGDA
LDRPVFVGGNLGLEWTTVRELVQILRANYCGKVGLEYMHIADVEERRFLQERMEGADKEI
EFTPEGKKAILQAVVRGEQYEKFLGKKYVGTKRFGLDGGESMIPALESVIKYGGAQGVKE
IVYGMAHRGRLNVLANVMAKPYKVIFHEFSGGTANPEDVGGSGDVKYHLGTSTDREFDGI
KVHMSLMPNPSHLETVDPVVLGKVRAYQVFHDDIGDDVGPGAKHKQVLPVLIHGDAAFAG
QGVVWECFGLSGVAGYNTGGCIHFVINNQIGFTTTPNFARNSPYPTDVAKGVQAPILHVN
GDDPAAVTFACKLAIDYRQTFGRDIVIDMWCYRRFGHNEGDEPSFTQPLMYAQIKKHPSV
STIYAERLKAEGVIDDAFLAATVEGFNNHLEEEFEAAKTYKANHADWFGGRWSGFNKPVD
PETARRNVHTGIEGKLFDSLGRTLTTVPDDLTIHKTLARVIQAKDEMFKTGEGFDWATAE
ALAFGSLVSEGYGVRLSGQDCERGTFSQRHAVWVDQKTERKYTPLETLPHGTFEVLNSTL
SEYGVLGFEYGYASADPKTLVLWEAQFGDFANGAQIIIDQYIAASEAKWLRANGLVMLLP
HGYEGQGPEHSSARLERYLQLCASDNLQVCNITTPANYFHVLRRQMHRPFRKPLIIMTPK
SLLRHPMAKSPASDFVGEGHFFRILSDPKAPSDEKTKKVILCSGKVAYDLFEARDQNDID
DTQIIRIEQLYPFPGEPLALRLSRMKNLEEIVWCQEEPKNNGAWFFVESLIEESAKEAGV
SACRPRYAGRGASASPATGLAKRHAAEQAALVADALHLSVRDELRRKQKA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgaaaatctcgatttcactccggacctcggcatggacgaaccccagcccgga
ccgagctggcagcgcagcaactggccgcgcgtaggggccgagttcgaagacgacctcacc
cagggcctcgatcccacggccctcaaggtccagatcgaaaaggccgctgccaagggcggc
aagaaggtcgaccaggctagcctcgaccaggctgccgccgacgcgatccgcgccatgatg
ctgatccgcacctatcgcgtgcgcggtcacctggcggcggacctcgacccgctcggcctc
aaccagcgcaagctgccgcaggacctcacccccgaataccacggcttcaccggcgacgcg
ctcgaccggcctgttttcgtcggcggcaacctcggcctcgagtggaccacggtgcgcgaa
ctggtgcagatcctgcgcgccaactactgcggcaaggtcggcctcgaatacatgcacatc
gccgatgtcgaggaacgccgtttcctccaggagcggatggaaggcgccgacaaggaaatc
gagttcacccccgagggcaagaaggcgatccttcaggccgtcgtgcgcggcgagcagtac
gagaagtttctcggcaagaagtacgtcggcaccaagcgcttcggcctcgacggcggtgaa
tcgatgatcccggcgctggagtcggtgatcaagtacggcggcgcccagggcgtcaaggaa
atcgtctacggcatggcccaccgcggccgcctcaacgttctcgccaacgtgatggccaag
ccctacaaggtcatcttccacgaattctccggcggcaccgccaaccccgaggacgtcggc
ggttcgggcgacgtgaagtaccacctgggcacttccaccgaccgcgagttcgacggcatc
aaggtccacatgagcctgatgcccaacccctcgcacctcgaaacggtcgatccggtcgtg
ctcggcaaggtccgcgcctaccaggtcttccatgacgacatcggcgacgacgtgggcccc
ggcgccaagcacaagcaggtcctgccggtgctgatccacggcgacgcggccttcgccggc
cagggcgtggtgtgggaatgcttcggcctttcgggcgttgccggctacaacacgggcggc
tgcatccacttcgtcatcaacaaccagatcggcttcaccacgacgccgaacttcgcgcgc
aactcgccctacccgaccgacgtcgccaagggtgtccaggcgccgatcctgcacgtcaac
ggcgacgatccggccgcggtgaccttcgcctgcaagctggcgatcgactatcgccagacc
ttcggccgcgacatcgtgatcgacatgtggtgctaccgccgcttcggccataacgaaggc
gacgagcccagcttcacgcagccgctgatgtatgcgcagatcaagaagcacccctcggtc
agcacgatctacgccgagcgcctgaaggccgaaggcgtgatcgacgacgccttccttgcc
gcgacggtggaaggcttcaacaaccacctcgaagaggaattcgaggcggccaagacctac
aaggccaaccatgccgactggttcggcgggcgctggagcggcttcaacaagccggtcgat
ccggaaaccgcgcgccgcaacgtgcataccggcatcgagggcaagctgttcgacagcctc
ggccgtaccctcaccacggtccccgacgacctgaccatccacaagaccctcgcccgcgtc
atccaggcgaaggacgagatgttcaagaccggcgagggcttcgactgggccaccgccgaa
gcgctcgctttcggcagcctcgtctccgaaggctacggcgtgcgcctgtccggccaggac
tgcgaacgcggtaccttctcgcagcgccacgccgtctgggtcgaccagaagaccgagcgc
aagtacacgccgctcgaaaccctgccccacggcaccttcgaggttctgaactcgacgctt
tcggaatacggcgtgctcggcttcgagtacggctatgccagcgccgatccgaagaccctg
gtcctgtgggaagcgcagttcggcgacttcgccaacggcgcgcagatcatcatcgaccag
tacatcgccgcatcggaagccaagtggctgcgcgccaacggcctcgtgatgctgctgccg
cacggctacgaaggccagggtccggagcactcctccgcccgcctcgaacgctacctgcag
ctctgcgcctcggacaacctccaggtgtgcaacatcaccaccccggccaactacttccac
gtgctgcgccggcaaatgcaccgtccgttccgcaagccgctgatcatcatgacgcccaag
tcgctgctgcgccatccgatggcgaagtcgccggcttcggacttcgtgggcgaaggccac
ttcttccgcatcctgtcggacccgaaggcgccgagcgacgagaagaccaagaaggtcatc
ctgtgttcgggcaaggtcgcctacgacctgttcgaggcgcgcgaccagaacgacatcgac
gacacccagatcatccgcatcgagcagctctaccccttcccgggcgaaccgctggccctg
cgcctctcgcgcatgaagaacctcgaggagatcgtctggtgccaggaagagcctaagaac
aacggcgcctggttcttcgtcgaatcgctgatcgaggaatccgccaaggaagccggcgtc
tctgcgtgccgtccgcgctatgccggccgcggcgcctcggcctcgcccgcaaccggcctt
gccaagcgccatgccgccgaacaggccgcgctggtggccgatgcactccacctttccgtc
cgtgacgaactccgacgcaagcagaaggcttga
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