Nyctereutes procyonoides (raccoon dog): 129494222
Help
Entry
129494222 CDS
T09008
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129494222 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129494222 (CLP1)
Enzymes [BR:
npo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
129494222 (CLP1)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
129494222 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
MMR_HSR1
AAA_18
TniB
AAA_16
AAA_22
nSTAND3
CbiA
Motif
Other DBs
NCBI-GeneID:
129494222
NCBI-ProteinID:
XP_055156985
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MGEEANDDKKPTTKFELERETELRFEVEASQSVQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEKEEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRRECRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENLSETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggagaggaggccaatgacgacaagaagccaacaactaaatttgaactagagcgagaa
acagaacttcgctttgaggtggaggcatctcagtcagttcagttggagctgctggctggc
atggcagaaatatttggcacagagctgacccgaaacaagaaattcacctttgatgctggt
gccaaggtggctgttttcacttggcatggttgttctttacagctgagtggccgcaccgag
gtggcttatgtctccaaggacactcctatgttgctttatctcaacactcacacagccttg
gagcagatgaggaggcaggcggagaaggaagaagagcgaggtccccgggtgatggtcgtg
ggccccactgatgtgggcaagtccacagtgtgccgtctgctgctcaactatgcagtgcgt
ttgggccgccgtcccacttatgtggagctggatgtgggccaggggtctgtttccatccct
ggtaccatgggggccctctacattgagcggccagcagatgttgaagagggattctctatc
caggcccctctggtgtatcattttggctccaccactcctggcaccaacatcaagctttat
aataagattacatctcgtttagcggatgtgttcaatcaaaggtgtgaagtgaaccgaagg
gcctctgtgagtggctgtgtcattaacacgtgtggctgggtcaagggttctgggtaccag
gccctggtgcacgcagcctcagcctttgaggtagatgtggttgtggttctggatcaagaa
cgactgtacaatgaactaaaacgcgacctgcctcacttcgtccgaactgtgctgctccct
aaatcagggggtgtggttgaacgctccaaagacttccggcgggagtgtagggatgagcgt
atccgtgagtatttctatggattccggggctgtttctatccccatgccttcaatgtcaaa
ttttcagatgtgaaaatctacaaagttggggcacccactatcccagactcctgtttgcct
ttgggcatgtctcaggaggacaatcagctcaagctagtaccagtcacacctggacgagat
atggtgcaccaccttctgagtgttagcactgctgagggcacagaggagaacctttctgag
accagtgtggctggcttcatcgtggtgaccagtgtggacctggaacatcaggtgtttact
gttctctctccagccccccgcccactgcctaagaacttccttctcatcatggatatccgg
ttcatggatcttaagtag
DBGET
integrated database retrieval system
