Nyctereutes procyonoides (raccoon dog): 129510918
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Entry
129510918 CDS
T09008
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
129510918 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129510918 (POLR1A)
Enzymes [BR:
npo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
129510918 (POLR1A)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
129510918 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
129510918
NCBI-ProteinID:
XP_055183228
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MLGSKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFNNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHILTCPRAVIHLL
VCQLRVLEVGALQAVYELERILNRFLEENADPTAFKIQEELEQYTAKIVQNNLLGPHGAH
VKNVCDSRSKLIAYFWKAHMTAKRCPHCKTGRSVVRKEHNSKLTVTYPAVVHKKADQKDT
ESLGIEETQLGKRGYLTPTSAREHLTALWKNEGFFLNYLFSGLEDVDMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDMVLIRKLLALMAQEQELPFEVSGPAK
DEEKDSSIALDRSFLSMLPGQSLTDKLYNIWIRLQSHVNIVFDSEMDKLMMEKYPGIRQI
LEKKDGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDLTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHHARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQYMELLYRG
LTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDRIPLSLSGKAKISGKAWVQES
PRPVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKRKADMKRHLVIEESTHCGPRAVRAALNLPEAASCD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPDNNLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYKVIMKSKCLHEVLSRADPQKALRHFRAIKKWQSKHS
NALQRKGAFLNYSQKIQAAVKALNLEDGNQNGRSLGTHQILKMWGELDEQSRRKYQKKAA
PCPDPSLAVWRPDIYFASVSETFEKKVDDYSLEWAAQAEKSYKKSELSLDRLRTLLQLKW
QRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVFNTKKALKRVKSLKKQLTRVCLGEVLEKIDVQESFRIGEKQDKFQVYQLRFQ
FLPHAYYQQEKCLRPEDILHFMETRFFKILMESLRKKNNKASAFRSVNTRRATQRDLDNS
GESERNRGEREGDEEEEGPIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEVEEENEDE
DMQEEEHISGNSAHKAQEQDEEVGSGPEDLPPAAPLTQPRKSTQNREPQGAEAKERRVQA
VRESHPFIEDYQYDTEESLWCQVTVKLPLMKINFDMTSLVMSLAQSAVVYATKGITRCLL
NETTNKKNEKELVLNTEGINLPELFKYAEVLDLSRLYSNDIHAMASTYGIEAALRVIEKE
IRDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQFLKQA
TMMGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctcaaagaacatgccctggcggaggctgcagggcatttccttcgggatgtac
tcggccgaggaactcaagaaattaagtgttaagtccattacgaaccctcgttatctggac
agcctggggaacccatcagcgaatggcctgtacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgcgttcaagacttcaacaactgctctggccacctgggccac
attgagcttccactcacggtgtacaaccctctcctctttgataaactctacctactgctc
cggggttcctgtttaaactgtcacatactgacctgcccccgggctgtgattcacctctta
gtctgccagctgcgagttctggaagtgggggctctacaagctgtctacgagctcgagaga
atcctgaataggtttctggaagaaaatgctgatcctactgccttcaaaattcaggaagag
ttagaacaatatacagccaaaatagtacagaataatctgttgggaccccacggtgcacat
gtgaaaaatgtttgtgatagcaggagcaagctcattgcttacttctggaaggcacatatg
actgccaagcggtgtccccactgcaaaactgggcggtcagttgtccgaaaggagcacaat
agcaagctgacagtcacatatccagccgtggtgcacaagaaggctgaccagaaggacaca
gagtctctaggaattgaggaaactcaattgggaaaacgagggtacctaacacccaccagt
gcccgagaacatcttactgcgctttggaagaacgaaggattctttctgaattaccttttt
tctggactagaagatgttgacatggagtctagattcaatcccagtgtgttctttttggat
ttcctggtggtgccaccctcaaggtatcgccctgtcagtcgactgggggaccagatgttt
accaatggccagacagtgaacttgcaggctgtcatgaaggacatggttctgatccggaaa
cttctagcattgatggcccaagaacaggagctgccatttgaggtgtcaggacctgccaag
gatgaggaaaaagactcttcgattgctctggaccgatcctttttgagcatgcttccaggc
cagtccctcacagacaaactttacaacatttggattcgtctccagagccacgtcaatatt
gtgtttgatagtgagatggacaaattaatgatggagaagtaccctggcattagacagatc
ctggagaaaaaagatggtttattccgaaagcacatgatgggaaagcgagtggactacgct
gcccgctcagtcatctgtccagacatgtacattaacaccaacgagattggaattcccatg
gtgtttgccacaaaactgacctatcctcagccagtcaccccctggaatgttcaggaactg
aggcaagcagtcatcaatggccccaacgtgcacccgggagcctccatggtcatcaatgaa
gacggcagccgcacagctttgagtgctgtcgacctgacacagcgggaagccgtggccaaa
cagctcctgacaccagccacaggggcacctaagccccaggggacaaaaatcgtgtgcagg
catgtgaagaatggggacatcctcctgctgaaccggcagcccaccctacacagaccctct
atccaggcacaccacgcccgcatcctgcctgaagagaaagtcctgcggctccactatgcc
aactgcaaggcatataacgctgattttgatggagacgagatgaatgcccacttcccccag
agtgaactgggccgggctgaggcctatgtcctggcctgcacagatcagcagtaccttgtt
cccaaggatggccagccattggcggggttgatccaagatcacatggtttcgggtgcgaac
atgaccattcgaggttgctttttcactcgggagcaatatatggagctgctataccgaggg
ctcacagacaaagtggggcgcgtgaagctctttcctcctgccatcctgaaaccctttcca
ctgtggacaggaaaacaggttgtgtcaacactgcttataaacataatcccagaggaccgc
atcccactgagcttatctggaaaagcgaagatcagtggcaaagcctgggtgcaggagtct
cctcggcccgtccccggctttaaccctgactctatgtgcgagtcccaggtgatcatcaga
gaaggggaactgctctgtggtgtgctggacaaagcgcactatgggagctctgcctatggc
ctggtccactgctgctatgagatctatggcggggagaccagcggcaaggttcttacctgc
ctggcacgcctcttcaccgcctacctacaactctatagaggtttcaccttgggtgtggaa
gacattctggttaagcggaaggcggatatgaagagacacctggtcattgaagagtccacc
cactgtgggccgcgggctgtcagggctgcgttaaacctgccagaagccgcatcatgtgat
gaggtccgagggaaatggcaggatgcccatttgggcaaagaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccatttggcctgcacagacagttcccagacaacaacttgcagatgatggtgcagtct
ggagccaaaggttcaactgtgaacactatgcagatttcatgcctgctaggccaaatcgaa
ttggaaggtcggagaccccccctgatggcgtctggcaaatcactgccctgctttgagcct
tatgagttcaccccaagggctggtggtttcgtcactggcagattcctcactggcatcaag
cctcctgagttcttctttcactgcatggcagggcgagagggtctagtggacactgctgtg
aagaccagccgctccggctatctccaaagatgtatcatcaagcacttggaggggctggtc
gtccagtatgatttgaccgtccgtgacagcgatggcagcgtggtacagtttctgtacggg
gaggatggcctggacatcccgaagacgcagttcctgcagcccaagcagttccccttcctc
gccagcaactataaggtgataatgaaatcgaagtgtcttcatgaagttttatccagagca
gatccccaaaaagctctccgtcacttcagagccatcaaaaaatggcaaagcaagcattcc
aatgccctgcagagaaaaggcgccttcttgaattattcacagaaaattcaggcagctgtg
aaagccttgaatcttgaggatgggaaccagaatggccgcagccttgggacgcaccagatc
ttgaagatgtggggtgagttagatgagcagagtcgaaggaaataccagaagaaggcagct
ccctgtcctgaccccagtctggctgtctggcgcccagacatctattttgcatcggtgtca
gaaacatttgaaaaaaaggtggatgactacagtctcgagtgggcagctcaagcagaaaag
agttacaagaaatcagaactttctcttgacagattgaggactctactgcagctgaagtgg
cagcgctcgctatgtgacccgggtgaggctgtgggcctgctggctgcccagagcattgga
gagccctccacacagatgaccctgaacaccttccactttgctggcagaggcgagatgaat
gtcaccctgggcattccaaggttgagggagattctcatggtggccagtgccaatatcaag
acacccatgatgagcgtgcccgtgttcaacaccaagaaagccctgaagagagtgaaaagt
ctgaagaagcaactcaccagagtatgcttaggggaggtgttggagaaaattgacgtccaa
gagtccttccgtattggagaaaaacaggacaagtttcaggtgtaccagttgcggtttcag
ttcctgccacatgcatattaccagcaggagaagtgcctgagacctgaggacatcctgcac
ttcatggaaacaaggttctttaaaattctgatggaatccctcagaaagaagaataataaa
gcttcagctttcagaagtgttaacactcggagagctacccagcgggatctagacaactct
ggggagtcggagaggaatcggggagaacgggaaggcgatgaggaagaggaggggcccatt
gtggacgctgaagctgaggagggagacgctgatgcctctgatgccaaacgcaaggagaag
caagaagaggaggtcgattatgagagcgaggaggaggttgaggaggagaacgaggatgag
gacatgcaggaggaagagcacatctctgggaacagtgctcacaaggcccaggagcaggat
gaagaggtgggctctggccctgaggacttgccacctgccgcccccctcacacagccccgg
aaatccacccagaacagggagccccagggggctgaagccaaggagcgccgggtccaggcc
gtgcgcgagtcccacccattcattgaggactaccagtacgacactgaggagagcctgtgg
tgccaggtgacagtgaagctccctctgatgaagattaactttgacatgacctctctggta
atgtccttggcccagagtgctgtcgtctatgcaactaagggcatcacgagatgcctcctg
aatgaaaccaccaacaagaagaatgagaaggagcttgtcttaaacacagaaggaatcaac
ctgccagagctgttcaaatacgctgaggttctggacttgagccgcctctattccaatgac
atccatgccatggccagcacgtatggcattgaggctgcactgcgggtgatcgagaaggaa
atcagagatgtgtttgccgtgtatggcattgcggtggatccccgccatctctccctggtt
gccgactatatgtgcttcgagggcgtttacaagccgttgaatcgctttgggatccgatca
aactcctcccctctgcagcagatgacatttgagaccagcttccagtttctgaagcaggcc
accatgatgggatcgcatgatgaactgaggtccccttctgcctgcctcgtggtcgggaag
gtcgtcaagggcgggacaggcctattcgagctcaagcagccactgagatag
DBGET
integrated database retrieval system
