Novosphingobium sp. PP1Y: PP1Y_AT27609
Help
Entry
PP1Y_AT27609 CDS
T01515
Name
(GenBank) lysyl-tRNA synthetase, class I
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PP1Y_AT27609
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
npp01007
]
PP1Y_AT27609
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npp03016
]
PP1Y_AT27609
Enzymes [BR:
npp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
PP1Y_AT27609
Amino acid related enzymes [BR:
npp01007
]
Aminoacyl-tRNA synthetase
Class I (A)
PP1Y_AT27609
Transfer RNA biogenesis [BR:
npp03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
PP1Y_AT27609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1b
DUF903
Anticodon_2
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
CCA93536
UniProt:
F6IQ34
LinkDB
All DBs
Position
complement(2900465..2902066)
Genome browser
AA seq
533 aa
AA seq
DB search
MTENALIEAARVSKAWPFQEAQKLLKRYPDGKPGGEPMLFETGYGPSGLPHIGTFQEVLR
TTLVRHAYETLTGGAPTRLVAFSDDMDGLRKVPDNIPNAQLLADNLGKPLSRIPDPFGKF
ESFAHHNNAMLRDFLDRFGFEYEFVSASDRYNSGAFDSALSNVLSHYDAIMGVMLPTLRE
ERRKTYSPVLPVSPTTGAVLQVPVEVLDPATGMIRFADEDGSTVEQSVFGGHAKLQWKVD
WAMRWVDLGVDYEMCGKDLTDSVTQSGKISQILGRRKPEGLIYELFLDENGEKISKSKGN
GLTIEQWLTYGTEESLGFYLFREPKSAKQLHIGVIPKAVDEYWQFRGNLPDQPLEKQLGN
PVWHLLRATGNGEGAGDTLPVTFSLLLNLVGVLGADATADQVWSYLGNYVADATPEAHPE
LGELVRAALATNRDFIAPTLVRRAPDAHEAEALKALDAELAKAGPDTSAEELQNTVYEIG
KNEAYGFGNLRDWFKALYETLLGSSQGPRMGSFIALYGIPETRKLIAEALSSQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaatgccctgatcgaagccgcccgtgtgtccaaggcctggcccttccaggag
gcccagaagctgctcaagcgctatccggacggcaaaccgggcggtgagcccatgctgttc
gagaccggttacggtccctcgggcctcccgcatatcggcacgttccaggaagttctgcgc
acgacgctggtgcgtcacgcctacgaaaccctgaccggtggcgcgccgactcggctggtc
gccttttcggacgatatggacgggctgcgcaaggtcccggacaatattcccaacgcccaa
ttgcttgcggacaatctcggcaagccgctgagccgcattcccgatccgttcgggaagttc
gagagcttcgcgcatcacaacaacgcgatgctgcgcgatttcctcgatcgcttcggcttc
gagtacgagttcgtctcggccagcgaccgctacaattccggtgccttcgacagtgccctg
tcgaacgtgctctcacactacgatgccatcatgggcgtcatgctgcccacgcttcgcgag
gagcgccgcaagacctattcgccggtcctgccggtgtcgccgaccacgggcgcggtgctg
caggtgccggtcgaagtcctcgatccggccaccggaatgatccgctttgccgacgaggac
ggctcgaccgtcgagcaatccgtcttcggcggccatgccaagctgcagtggaaggtcgat
tgggcaatgcgctgggtcgatcttggcgtcgactacgagatgtgcggcaaggacctgacc
gactcggtgacgcagtcgggcaagatctcgcagatccttgggcgccgtaagcccgaaggg
ctgatctacgaactcttcctcgacgagaacggcgagaagatctcgaagtccaagggcaat
ggcctcaccatcgagcagtggctgacctacgggaccgaggaaagtcttggcttctatctg
ttccgggagcccaagagcgccaagcagctgcatatcggcgtgatccccaaggcggtagac
gagtactggcagttccgcggcaaccttccggaccagccgctcgaaaagcagctcggcaat
ccggtctggcacctgctgcgcgcgaccggcaacggtgaaggcgcgggcgacaccctgccg
gtgactttctcgctgctgctcaacctcgtgggcgtgctgggcgccgatgcaaccgccgat
caggtctggtcgtacctaggcaactacgttgccgatgcgacgcccgaggcgcacccggaa
ctgggcgaactggtgcgcgccgccctggccaccaaccgggatttcatcgcgccgacgctg
gtgcgccgcgcgccggacgcccatgaagccgaagcgctcaaggcgctcgatgccgaactg
gccaaggctgggccggacacgtcggcagaggaattgcaaaacacggtctatgagatcggc
aagaacgaggcttacggcttcggtaatttgcgcgactggttcaaggcgctttacgaaacc
ctgctgggctccagccaggggccgcgcatgggcagcttcatcgcgctctatggcattccc
gagacgcgcaagctgatcgcagaagcgctttccagccaatga
DBGET
integrated database retrieval system
