Nanorana parkeri (Xizang Plateau frog): 108786392
Help
Entry
108786392 CDS
T04897
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
npr03016
]
108786392 (CDKAL1)
Enzymes [BR:
npr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
108786392 (CDKAL1)
Transfer RNA biogenesis [BR:
npr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
108786392 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
108786392
NCBI-ProteinID:
XP_018411180
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MPASCDSLLDDIEDIVSATDPKPHDRQSARQDVVPRVRKRNKNRIEEQPPSDSTIPGTQK
IWVRTWGCSHNNSDGEYMAGQLAAYGYSITESPEQADLWLLNSCTVKSPAEDHFRNSIKK
AQDENKKVVLAGCVPQAQPRQEYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDN
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGELASYSIEELVDRAKQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHIPIQSASDSVLMDMKREYCIADFKRVVDFLKERVPGITIATDIICG
FPGETDEDFKETLKLVEEYRFPSLFINQFYPRPGTPAAKMVQVPAHVKKQRTKELSQLFH
SYNPYDHKVGEKQQVLVTEESFDHQYYVAHNRFYEQVLVPKNPAFMGKMVEVDVYETGKH
YMKAKPLSESKMYTPSINKPLEKGEVSGLSEESKSLLKNGCLSKPKFSDARDKTSLHLAW
GDGGKQMKILYFIAAVIGVFIAFLGARIIHSEVVGN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttcttgtgactcattacttgatgacattgaagacattgtctcagcaacagac
cctaagccacacgatcgtcagtctgcaagacaggatgttgttcccagggtccgtaaaaga
aacaaaaacagaattgaagagcagcctccaagcgacagcaccattccgggcactcaaaag
atttgggtacgcacatggggctgttcacataacaactctgatggagagtacatggcgggc
cagttggctgcatatggctacagtataacagagagtccagaacaagcagacctgtggcta
ttaaacagttgcacagtgaagagccccgcagaagaccactttaggaactcgataaaaaag
gcacaggatgaaaataaaaaagttgttttggctggatgtgtccctcaggctcaacctcgt
caagaatatctcaagggcctcagtataataggggtccaacagattgatcgagtagtagaa
gttgttgaagaaacaattaaaggtcattcagtgcgactgctgggtcagaaaaaggataat
ggaaaacggttggggggagctcgattggatttgccaaagattaggaagaacccactgata
gaaatcatttccatcaatacagggtgcctaaatgcatgtacctactgcaaaacaaaacat
gcacgaggggagcttgccagttattctatagaagaattggttgaccgggcgaaacagtct
tttcaagagggtgtttgcgagatttggctgaccagtgaagacacaggagcttatggtaga
gacattggcactgaccttccaacactcctatggaaactggttgaagttattcctgagggc
gcaatgctaagacttggcatgaccaaccccccctatattttagaacatctagaggaaatg
gcaaagattttaaaccatcctcgtgtgtacgcgtttctgcacatccccatacaatcggct
tcagacagtgtgcttatggatatgaagagagaatactgcatagcagacttcaaaagagtt
gtggatttcttaaaggagagagtgcccggaattacaattgctacggacatcatctgtggc
tttcctggagagacggatgaagattttaaggagacgttaaagctagttgaagaataccga
ttccctagcctcttcattaatcagttttacccgcgcccagggaccccagctgcgaaaatg
gtgcaggttccagctcatgtgaaaaaacagcggacaaaagagctgtcccaacttttccat
tcatacaatccatatgaccataaggtgggtgaaaagcagcaagttctagttacagaagaa
tcatttgatcaccagtactatgttgcccacaatcgtttttatgaacaggtccttgtgcct
aaaaacccagccttcatggggaagatggttgaagtagatgtatatgaaacaggaaagcat
tacatgaaggcaaaacctttgtcagagtcaaagatgtatacaccctccatcaacaagcct
ctagagaaaggagaggtttctggcttatctgaggagagcaagtcattgctgaaaaatggt
tgtctttcaaaaccaaagttttctgatgcacgtgacaagacctccctacatctagcctgg
ggtgacggtggaaaacagatgaagatactttactttattgctgcagtgataggagttttt
attgcatttctaggagcaagaatcattcacagcgaggttgtaggaaattga
DBGET
integrated database retrieval system