Nanorana parkeri (Xizang Plateau frog): 108791458
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Entry
108791458 CDS
T04897
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108791458 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
npr04090
]
108791458 (VCAM1)
04091 Lectins [BR:
npr04091
]
108791458 (VCAM1)
CD molecules [BR:
npr04090
]
Proteins
108791458 (VCAM1)
Lectins [BR:
npr04091
]
I-type lectins (Siglecs)
108791458 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
V-set
ICAM_N
Ig_6
Ig_4
Ig_5
Izumo-Ig
REJ
SGF29_Tudor
NERD
Motif
Other DBs
NCBI-GeneID:
108791458
NCBI-ProteinID:
XP_018417456
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MSGGLGTPTVTIVIGYIIYLQVIFTHGYAKNITLISTQSIITSQIGEELRITCLGTKCQN
PDFIWAALSDNPLRGTINNNGQISVLTMKISSENLDSYDSYRCTVSCDNPPAEKGFKIIV
YSFPEPILTISSLMAGEQSHIACTIPDAYPFYMFNARILVGEKIVAEYKVPETDDFHVVK
NISLSHDLMLTDEYEAKEVKCEADLQFQEEEDKEIAPINRNTTVYLSLLYPPGKPVITVY
PDTNVFAAENISLSCTYESRSPANVKWVKLDKEKELVMSHDQGILAIPHAEQEDSGVYIC
RVQNNVGTTSSEVQITVQVPPENTFLTITPSLVTRGESVHIRCTSEAFPAPRLVLKKQTK
TGLMELEAEDGQYSITHMTEDQAGTYICEASNVVGLQDAEATVTVQVPPKNTHITITPPA
GVREGDFIDIRCSSEASPAPRLVLKVKTEHGVRELVSEGGQSQIEHAAITHSGTYICEST
NVAGQQIVETTLTIQVPPKKTVLTISPSPLLKEGESGYVRCTSEAFPAPRLVLKKKTEAG
LIELEMENGEYSITQVGVQHAGTYLCESTNEAGQQTAETTLIVQAPPKNTLISITPSSVV
KEGEDVQIQCLSEAYPSPKLVLLLKTKHGLISQLESDDGLYNITNAGEKNMGTYICESTN
VIGQQTAEATLTVQIPPRKTTIVTPSQNITAGVTVTITYDTHIIPPPERQQSSRFDYVPP
AIIGSVVLLTAGFIGTIAYHLKQAKVQGSYSLVKALRSKV
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtctgggaacaccaactgtgacaatagtcataggatatatcatctattta
caggtcatattcacacatggctatgccaaaaacatcacccttataagtactcagtctata
atcacatctcagattggggaagagcttcgtattacttgtctaggcaccaaatgtcagaat
ccagacttcatctgggctgccctgagtgacaatccattacgtggtacaatcaacaataat
ggacaaatatctgtcctcaccatgaagatcagcagtgagaaccttgactcatatgattcc
tatcggtgcaccgtgagttgtgataatcctcctgcggaaaaaggctttaaaatcatagtt
tactcattccctgaacccatcctgaccatctcatctcttatggctggagaacagtcacac
atcgcctgtactattcctgatgcctatccattttacatgtttaatgctcggatcttggta
ggagagaagattgtggctgagtataaggtcccagagacagatgacttccatgtagtgaaa
aatatcagcctatctcatgatttaatgctgactgatgaatatgaggccaaagaagtaaaa
tgtgaagctgacctacaatttcaggaagaagaagacaaagaaattgctcctataaatcgg
aatacaactgtgtacctcagccttctatatcctccaggaaaaccagttattacagtttac
cctgacacaaatgtatttgcagcagaaaacatctctctgtcttgtacatatgaaagtaga
tccccagctaatgtaaaatgggtgaaactggataaggagaaggaactggtgatgtcccat
gaccagggaattctggcaattccacatgcagagcaagaagatagtggggtgtacatctgc
cgtgtgcaaaacaatgtaggaacaacatcttcggaagtgcagatcactgtacaagttcca
cctgaaaacacatttctaaccatcactccatctttggtgacgagaggggagagtgtacat
atcaggtgcacatcagaagcttttcctgcccccaggctggtgttgaagaagcagacaaag
acaggcctgatggagttagaagctgaggatgggcagtatagtattacacacatgacagaa
gatcaagcagggacttatatatgtgaggcctcaaatgtggtgggactgcaagatgctgag
gctactgtaactgtacaagttccacccaagaatacacatataaccatcacacccccagca
ggggttagagagggagatttcatagacatcagatgtagttccgaagcttctcctgctccc
agacttgttctgaaggtgaagacagaacatggtgtacgagagctggtatcggagggtgga
caatcccaaattgaacatgctgctataacacacagtggaacatacatctgtgaatctaca
aacgttgcaggacagcaaatagtggagaccacactgaccatacaagttccacccaaaaaa
actgttttgactatcagcccttcgccattgttgaaagaaggagagagtggatatgttagg
tgcacatcagaagcttttcctgcccccagattggtgctaaagaagaagacagaggccggc
ctgattgagctagaaatggagaatggggagtacagtattacacaagttggagtacagcat
gcaggcacatatttatgtgaatccacaaatgaagctggacagcaaacagctgagaccaca
ctcattgtacaagcgccacccaaaaacactttgatatcaatcactccatcttcagtggtg
aaagagggggaggatgtacagatccagtgtttatctgaagcatatccttccccaaagctt
gtcctcttgctaaagacaaaacatggcctcattagccagttggaatctgatgatggattg
tacaatatcacaaatgcaggagagaagaatatggggacatacatctgtgaatctacaaat
gtgatcggacagcaaacagcagaggccacgctgactgtacaaattccaccacgaaaaacc
acaattgtgactccatcacagaacatcacagcaggtgttactgtcactatcacttatgat
acccacatcatcccacctccagagcgacagcaaagctcaagatttgactacgtgccacca
gcgatcattggatctgtagtccttttaacagctggctttataggaacaattgcttatcat
cttaagcaggcgaaggtccaaggatcctacagcttggtcaaagcattgaggagcaaagta
tga
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