Nanorana parkeri (Xizang Plateau frog): 108795933
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Entry
108795933 CDS
T04897
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04020
Calcium signaling pathway
npr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108795933 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108795933 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npr04040
]
108795933 (GRIN1)
Ion channels [BR:
npr04040
]
Ligand-gated channels
Glutamate (ionotropic)
108795933 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Motif
Other DBs
NCBI-GeneID:
108795933
NCBI-ProteinID:
XP_018422772
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MDRMRLFLLAVLFLFSFARAGCDPKIVNIGAVLSTKKHEGLFRDAVNQANKRHGTWKIQL
NATSVTHRQNAIQMALSVCEDLISSQVYAILVSHPPAPTDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQAVVWFEMMRIFGWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLEQLSYDNKRGPKAEKVLHFEPGTKNVTALLTEAKGLEARVI
ILSASGDDASTIYKTAAVLDMTGSGYVWLVGEREISGSALRYAPDGVIGLQLINGKNESA
HISDAVAVAAQAIHELFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIFNGSHILQNDRKIIWPGGETEKPEGYKMSTNLK
IVTIHQEPFVYVKAALPDGSCKEEFGITGELIKKVPCSGPNDTIPGRPTTPQCCYGFCID
LLLKLAKEMSFNYEFHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNTEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLNILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFR
SITSTLASSFKRRRSSKDTQYHPTDITGQLNLSDPSVSTVV
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggacaggatgcgcctgtttttgctggcagtgctctttttgttctcgtttgcccgggct
ggatgtgaccccaaaatcgtgaatatcggggcagtactgagcaccaagaaacacgaggga
ctattcagggatgctgtgaaccaagccaacaagaggcatggtacctggaagatccagctc
aatgccacctctgtcacccacaggcagaatgccattcagatggctctgtccgtctgcgag
gacctcatctccagtcaggtttacgccatattagtcagtcaccctccagctccaacagat
cacctgacccccacgccggtctcctacacagctggattctatcgaataccggtcatcggg
ctaacaaccaggatgtcgatatattctgataagagtatccatctgtctttcctccgcacg
gtcccaccatactcgcaccaggctgtggtctggtttgagatgatgcgtatctttggctgg
aatcacgtcattctcattgtgagtgatgaccatgagggccgggcagcccagaagaagctg
gagaccctcttggaagagagagaatccaagagtaaaaaaaggaactatgaaaacctcgaa
caactttcctatgacaacaagcgtggacccaaggcagaaaaagttcttcattttgagcct
ggaaccaaaaatgtgactgctcttctgacggaagccaaaggcctagaagctagagtgatc
atcctctctgcaagtggtgatgatgccagtactatatacaagacagcagccgtgttggac
atgacaggctctggctatgtgtggttggttggagaaagagaaatttctggaagtgcctta
cgatatgcgcctgatggggtcatcggtcttcagctgatcaatgggaagaatgaatccgct
cacatcagtgatgcagtggctgttgctgctcaggcaattcatgagctttttgaaaaagaa
aatatcactgacccgccacgagggtgtgtgggaaacaccaacatctggaaaacagggccg
ctattcaagagagtgctaatgtcttccaaatacccggaaggagtcacaggaagggtggaa
tttaatgaggatggagacagaaaatttgctaactacagcattatgaaccttcaaaaccgg
aaacttgtccaagttgggatattcaatggaagccacattttacagaatgacagaaagatc
atttggccgggaggtgaaacagaaaaacctgaagggtacaaaatgtcaaccaatctaaag
atagtgaccattcaccaagaaccgttcgtttacgtcaaagcagcattaccagatggttcc
tgtaaggaggagtttggtatcactggggagctgatcaaaaaggttccatgctcagggccc
aatgacaccatcccaggtcgtcccaccactccccagtgctgttacggcttctgcattgac
ctgctgctgaaactggccaaagagatgagtttcaactatgaattccacctggtagctgat
ggaaagtttggtacacaggagcgagttaataacagcaataagaaagaatggaatggaatg
atgggcgagttactgagtggacaagcggacatgatcgtcgcacctctgaccatcaacaac
gaaagagctcagtatattgaattttccaagccattcaaatatcaggggctcaccatcctt
gtgaaaaaggaaatacccagaagtaccttggactcattcatgcagcctttccagagcacc
ctgtggctcctggtgggtctctctgtccatgtggtggcggtaatgttgtatcttctggac
agattcagtccttttgggcggtttaaagtgaacacagaagaggaagaggaggatgcactg
acgctctcttctgccatgtggttctcctggggtgtccttctgaactctggtattggagaa
ggagcaccgaggagtttttctgctcgcatcttaggcatggtttgggctggatttgctatg
atcatcgtagcttcttacactgccaacctggctgccttcctggtgttggacaggcctgag
gagaggataacaggaatcaatgaccctcggctgcgaaatcccagcgacaagtttatttat
gccactgtcaagcagagctccgtggacatttacttcaggaggcaggtggaactgagcacc
atgtaccggcatatggaaaaacacaactatgagagcgccgctgaggccattcaggcagtt
cgagacaataaactccatgccttcatctgggactcggcagtgctggaattcgaggcctcc
cagaagtgtgacttggtcactactggagaattattcttccgctctggttttgggattggt
atgaggaaggatagtccgtggaaacaaaacgtgtcactgaacattctcaaatctcatgag
aatggattcatggaagatcttgataaaacttgggtcagatatcaggaatgtgattctcgc
agcaatgcgccagctacgcttacatttgagaacatggcaggtgtcttcatgctggtggct
ggtggtattgttgctggaatcttcctgatatttattgagattgcatacaagcggcacaaa
gatgcccgcaggaaacagatgcagcttgcctttgccgccgttaatgtctggagaaaaaac
ctgcaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagcctcttttagg
tccatcacctccaccctggcctccagcttcaagagacgtaggtcctccaaagacacgcaa
taccatcccaccgacatcactggtcagcttaatctatccgacccttctgttagcactgtg
gtgtaa
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