Nanorana parkeri (Xizang Plateau frog): 108803272
Help
Entry
108803272 CDS
T04897
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03020
RNA polymerase
npr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108803272 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
108803272 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npr03021
]
108803272 (POLR2A)
03400 DNA repair and recombination proteins [BR:
npr03400
]
108803272 (POLR2A)
Enzymes [BR:
npr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108803272 (POLR2A)
Transcription machinery [BR:
npr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108803272 (POLR2A)
DNA repair and recombination proteins [BR:
npr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108803272 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
108803272
NCBI-ProteinID:
XP_018430606
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
FKFDYNNERALRRTLQEDVVKDILSNAHIQNELEKEFEKMKEDREVLRVIFPTGDSKVVL
PCNLLRMIWNAQKIFHINTRIPSDLHPIKVVDGVKDLSKKLVIVNGEDPLSRQAQENATL
LFNIHLRSTLCSRRMIEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPA
TQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILC
RLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNIYYEMPDFDVTRISPWLLRVELDRK
HMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSEENKMQEEEEVVDKM
DDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITDEGEFKALQEWILETD
GVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLA
LLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIM
LGQLAPAGTGCFDLLLDAEKCKFGMEIPTNIPGLGAVGPTGMFFGSAPSPMGGMSPSMTP
WNQGATPAYGAWSPSLGSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSS
PYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PNYSPSSPNYTPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPSYT
PSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP
TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST
YSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
NT seq
3157 nt
NT seq
+upstream
nt +downstream
nt
gtttaaatttgattacaacaatgagcgagccttgcgccggactttacaggaggatgttgt
gaaggatattctcagcaatgctcacatccagaatgagctggagaaggagtttgagaagat
gaaggaggacagagaggttctgagagtgattttccctacaggagacagtaaggttgtgct
gccttgtaacctgctgaggatgatatggaacgcacagaagatatttcacattaatacccg
gataccctcagatctgcaccccataaaagtggtggatggtgtgaaggacctcagtaagaa
gttggtgattgtcaatggggaggatcctctgagccggcaggcgcaggaaaacgccacgct
tttgtttaacatccatttacggtcaacactgtgcagcaggcggatgatcgaggagttcag
gctgagtggagaggccttcgactggctgctgggggagatcgagtccaagttcaaccaggc
cattgctcatccaggtgagatggtgggtgcactggccgctcagtcactcggagagcctgc
cacacagatgaccctcaacaccttccactatgccggtgtgtcggctaaaaacgtcacctt
gggagtcccacgtcttaaggagctcatcaatatttccaagaagccaaagactccgtccct
gaccgtcttcctgctaggacagtccgctcgcgatgctgagcgtgcaaaggatatcctgtg
ccgcttggagcatacaacactgcgcaaggtcactgccaacacagccatttactatgaccc
caatcctcagaatacagtggtagcggaggatcaggaatgggtcaatatctactatgagat
gccagactttgatgtgaccagaatctccccatggttactgcgtgtagagctggaccgcaa
gcacatgaccgatcgcaaactgaccatggaacagatcgcagagaagatcaatgctgggtt
tggcgatgatctgaactgtatatttaatgacgataatgccgaaaaactggttctgcgaat
tcgtatcatgaacagtgaggagaacaagatgcaagaggaagaagaggttgtggataaaat
ggatgacgatgtctttctgcgctgcattgaatcaaacatgctgacagatatgaccttgca
ggggatcgagcagatcagtaaggtctacatgcaccttccccagacggacaataaaaagaa
gatcatcattactgatgaaggggagtttaaggctcttcaggagtggattctggagacaga
tggagttagtctcatgcgagtcttgagtgagaaggatgttgacccagtgaggaccacatc
caatgacattgtggagatcttcacagtgttggggatcgaggctgtgcgcaaagctctgga
gagagaattgtaccacgtcatctcctttgatggttcctatgtcaactaccgtcacttggc
acttctgtgtgacaccatgacatgtcgaggacacttgatggccatcacccgtcacggtgt
gaacaggcaggacacaggacctctcatgaagtgttcttttgaagagacggtggatgtcct
catggaggcagcagcacatggtgaatcggaccctatgaagggggtgtctgagaacatcat
gttgggacagttggctccagctgggactggctgctttgatctcttactggatgcagagaa
atgtaaatttggaatggaaattccaacaaatattccaggacttggagctgtaggaccaac
tggtatgttctttggatccgctccaagtcctatggggggaatgtctccttctatgacacc
atggaaccagggtgctacaccagcctatggagcctggtcaccaagtctagggagtggtat
gacccccggagctgccggcttctctcccagcgctgcgtcagatgccagtggcttcagccc
aggatattcccctgcgtggtcccccacccctggctctccaggatctccgggaccctccag
tccatacattccctcaccaggtggggccatgtctcccagttattctccaacttcgcctgc
ttatgaaccaagaagccctggtggatacactccccagagtcccagctactcgccgacttc
tccgtcctacagtcctacatccccatcatattctcccactagccccaactacagtcctac
atctcccagctactcccccacatcacccagttattccccaacaagtcctagttactctcc
aacatctcccagttatagcccaacaagcccaagttacagccccacttcaccaagctactc
tccaacctctcccagctattcccccacaagtcccagttacagtcccacttctcccagtta
ttctcccaccagtcccagctacagcccaacatctcccagttattcccctaccagccccag
ttattcacctaccagtcccagctattctcccaccagtccaagttactcccccacctctcc
cagctactccccaacatcaccttcatacagcccaacgtctccttcttactcaccaacttc
tcccaactattcaccttcttctcccaactacacaccaacgtctcccagttacagccccac
aagtcccagttacagcccgacctctcccaattacagtcctacaagtcccagttattcacc
tacgtctcccagctactcgccttccagcccccgttatacaccccagtctccaagctatac
tcccagctctcccagctacagtccaagttcacccagctactccccaacaagcccaaaata
caccccaacaagtccatcttacagcccaagctctccagagtatacccctacatcacccaa
atactctccaacttcacccaagtactcgccaacttctcccaagtattctcctacctcacc
aacatattctcccacaaccccaaaatactctcctacatctccaacctattcaccaacctc
cccagtctatacccctacttcccccaaatactctcccacttctcctacatactcccctac
ttcccccaagtattcaccaacgtcccccacctactcgcccacaagtcctaaaggttccac
atactctccaacctcccctggatacagccccacctcacccacctacagtcttacgagtcc
agctattagtccggatgacagtgatgatgacaattga
DBGET
integrated database retrieval system
