Candidatus Nitricoxidivorans perseverans: OHM77_04270
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Entry
OHM77_04270 CDS
T09820
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
npv
Candidatus Nitricoxidivorans perseverans
Pathway
npv00540
Lipopolysaccharide biosynthesis
npv01100
Metabolic pathways
npv01250
Biosynthesis of nucleotide sugars
Module
npv_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
npv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
OHM77_04270 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
npv01005
]
OHM77_04270 (rfaD)
Enzymes [BR:
npv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
OHM77_04270 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
npv01005
]
Core region
OHM77_04270 (rfaD)
BRITE hierarchy
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
WIM06488
UniProt:
A0AA49FN01
LinkDB
All DBs
Position
complement(845196..846191)
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AA seq
331 aa
AA seq
DB search
MYTIVTGACGFIGANIVKALNDRGVSNIVAVDNLRKADKFRNLVDCEIADYLDKQEFMQL
VEEGYFDGAVEALFHEGACSDTMETDGRYMMENNYRYSLALLDFCLDQETPFLYASSASV
YGAGRVFREDRAHEAPLNVYGYSKFLFDQVVRRRLSEANSQVVGFRYFNVYGPREQHKGR
MASVAFHHFNQYRENGRVKLFEGCDGYANGGQSRDFVFVGDVVKVNLHFLDHPEKSGIFN
LGTGRAQPFNDVATSTVNACRAIEGKPALSLADMVAQGIVEYIDFPDALKGKYQSFTQAD
IAALRAAGYKDEFATVAQGVAEYVRQLAGGK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtataccatcgtcaccggcgcctgcgggttcatcggcgccaacatcgtcaaggccctc
aacgaccgcggcgtttcgaacatcgtcgccgtcgacaacctcaggaaggccgacaagttc
aggaacctcgtcgactgcgagatcgccgactacctggacaagcaggagttcatgcaactg
gtcgaggaaggctacttcgacggcgccgtcgaggccctcttccacgagggcgcctgctcc
gacaccatggaaaccgacggccgctacatgatggagaacaactaccgctactccctcgcg
ctgctcgacttctgcctcgatcaggaaacgcccttcctctacgcctccagcgcctccgtc
tatggcgcgggccgcgtgttccgggaggatcgggcgcacgaggcgccgctcaacgtctac
ggctattcgaagttcctgttcgaccaggtcgtgcgccgccgcctgtcggaggcgaactcg
caggtcgtcggcttccgctacttcaacgtctacggcccgcgcgagcagcacaagggccgc
atggcctcggtcgccttccaccacttcaaccagtaccgcgagaacggcagggtgaagctc
ttcgagggctgcgacggctatgccaacggcgggcagagccgcgacttcgtcttcgtcggc
gacgtggtgaaggtcaatctgcacttcctcgaccatccggagaagtcgggcatcttcaac
ctcggcaccggccgcgcccagccgttcaacgacgtggcaacgtcgaccgtcaacgcctgc
cgcgccatcgaaggcaaaccggcgctgtcgctggccgacatggtcgcccagggcatcgtc
gaatacatcgattttcccgacgcgctcaagggcaagtaccagagcttcacccaggccgac
atcgccgcccttcgcgccgccggctacaaggatgaattcgccacggtggcgcagggggtg
gcggaatacgtgcggcagttggcaggagggaaatga
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