KEGG   Nocardia mangyaensis: BOX37_09680
Entry
BOX37_09680       CDS       T04582                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
nsl  Nocardia mangyaensis
Pathway
nsl03030  DNA replication
nsl03410  Base excision repair
nsl03420  Nucleotide excision repair
nsl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BOX37_09680
   03410 Base excision repair
    BOX37_09680
   03420 Nucleotide excision repair
    BOX37_09680
   03440 Homologous recombination
    BOX37_09680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsl03032]
    BOX37_09680
   03400 DNA repair and recombination proteins [BR:nsl03400]
    BOX37_09680
Enzymes [BR:nsl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BOX37_09680
DNA replication proteins [BR:nsl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BOX37_09680
DNA repair and recombination proteins [BR:nsl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BOX37_09680
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BOX37_09680
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH_2
Other DBs
NCBI-ProteinID: APE34185
UniProt: A0A1J0VQ93
LinkDB
Position
2159899..2162661
AA seq 920 aa
MSGGVPRLTRVSSPTTAEASTTTTPGEGERPTLLLLDGHSIAYRAFFALPAENFKTVTGQ
TTNAVYGFTSMLINLLRDEKPSHVAAAFDVSRKTFRTEAYPEYKANRSATPDEFRGQVEL
TKDVLGAMGIPVMAIDGYEADDVIATLTTQAMAQGYRVLIVTGDRDAIQLVNDDVTVLYP
RKGVSDLTRFTPAEVETKYGLTPAQYPDYAALRGDPSDNLPGIPGVGEKTAAKWIREYGD
LATLVDKVDQVKGKVGDSLRANLSSVVLNRQLTEMVREVPLPYAPDQLAKAPWDRDKIHQ
LFDDLEFRVLRDRLFETLGSPEPEAESGFEISGGALDQGAVADWLAEHAKAGVRHGLSIV
GTGTPMHGDARALAIAAADGEGGYIDLAVLTPEDETALSAWLADPAVPKALHEAKAAGHA
LRGRGFTLAGLTSDTALSAYLVRPGQRSFNLDDLSLRYLKRELRAETGDSGQLSLLDDED
TLAADIAREEMLRARAVADLADALDAELAQIESTALLHEMELPLLGVLGELEEAGIAVDV
AQLESLQRQFADRVTEAANSAYEVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTTD
ADALESLFEKTGHAFLEHLLAHRDATRLKVTVDGLLKSVSDDGRVHTTFNQTIAATGRLS
STEPNLQNIPIRTDTGRQIRDTFVVGPGFAELMTADYSQIEMRIMAHLSGDEGLIEAFNS
GEDLHTFVASKAFDIPLSEVSPELRRRIKAMSYGLAYGLSSYGLSAQLKISTAEAKEQME
VYFDRFGGIRDYLADVVDQARKVGYTQTLFGRRRYLPDLDSSNRQRRESAERMALNAPIQ
GTAADIIKVAMINVQNAIREAGLRSRMLLQIHDELVFEVADGEREVLEALARDQMSEAIE
LSVPLDVSVGTGRSWDSAAH
NT seq 2763 nt   +upstreamnt  +downstreamnt
atgtcggggggtgtccctagactcactcgggtgagttcaccgacgactgccgaggcatcg
acaacgaccactcccggcgagggcgagcggcctacgctgctgctgctcgatgggcattcg
atcgcctatcgcgcgttcttcgcgctaccggcggagaacttcaagacggtcacggggcag
accaccaacgcggtgtacgggttcacctcgatgctgatcaatctgctgcgcgacgagaag
ccgagccatgtggcggcggcgttcgatgtctcgcgcaagacgttccgcaccgaggcctat
ccggagtacaaggccaatcgcagtgcgaccccggacgagttccgtggccaggtcgagctc
accaaggatgtgctcggcgcgatgggtattccggtgatggcgatcgacggctacgaggcc
gacgatgtgatcgcgacactcaccacccaggccatggcccaggggtaccgcgtgctcatc
gtcaccggtgaccgcgatgccatccagttggtcaacgacgatgtcaccgtgctgtacccg
cgcaagggtgtctcggatctgacccggttcaccccggccgaggtggagaccaaatacggg
ctgactcccgcgcagtatccggactacgcggcgctgcgcggcgaccccagtgacaacctg
ccgggtatcccgggcgtcggtgagaagaccgcggccaagtggatccgcgagtacggcgat
ctggccaccctggtcgacaaggtcgatcaggtgaagggcaaggtgggcgactcgctgcgg
gccaacctgtccagcgtggtgctcaaccgtcagctcaccgagatggtgcgcgaggtaccg
ctgccctacgcgccggatcagctggccaaggcgccgtgggaccgggacaagatccaccag
ctcttcgacgacctggaattccgcgtcctgcgcgaccggctgttcgagacgctcggttcg
cccgagccggaggccgagtccggcttcgagatcagtggcggcgctctcgaccagggtgcg
gtcgccgactggctggccgagcacgcgaaagccggtgtgcgccatggtctctcgatcgtc
ggtacgggcaccccgatgcacggtgacgcgcgagcgctggccatcgccgcggccgacggc
gagggcggctacatcgatctcgccgtgctcacccccgaggacgagaccgcgctgagtgcc
tggctggccgacccggccgtgcccaaggccctgcacgaggccaaggccgccgggcacgcg
ctacgcgggcgcggtttcaccctggccgggctcaccagcgacaccgccctgtcggcctat
ctcgtgcgccccggccagcgcagcttcaacctcgacgatctgtcgttgcgctacctcaag
cgcgaactgcgcgccgagaccggcgactccggccagctctcgctgctcgacgacgaggac
accctcgccgccgacatcgcccgcgaggagatgctgcgcgcccgcgcggtcgccgacctg
gccgacgccctcgacgccgaactggcccagatcgagtcgaccgcgctgctgcacgagatg
gaactgccgctgctcggcgtgctcggcgagctggaggaggcgggcatcgccgtcgacgtg
gcgcagctcgagtcgttgcagcgccagttcgccgaccgggtcaccgaggccgcgaactcc
gcctacgaggtgatcggcaagcagatcaacctgggctcgcccaagcagctgcaggtggtg
ctgttcgacgagctcgacatgccgaagaccaagcgcaccaagaccggctacaccaccgat
gccgacgcgctggaatcgctgttcgagaagaccggccacgccttcctcgaacacctgctc
gctcaccgcgacgcgacccggctcaaggtcaccgtcgacggtctgctcaagtcggtgtcc
gacgacggccgcgtgcacaccacgttcaaccagaccatcgccgccaccggcaggctctcc
tcgaccgaaccgaacctgcagaacatcccgatccgcaccgacaccggccgccagatccgc
gacaccttcgtcgtcggccccggcttcgccgaactgatgaccgcggactacagccagatc
gagatgcggatcatggcccacctgtccggggacgagggcctgatcgaggcgttcaactcc
ggcgaggacctgcacaccttcgtcgcgtccaaggccttcgacatcccgctgtcggaggtg
agcccggaactgcgccgccggatcaaggccatgtcctacggcctggcctacggcctgagc
tcctacggcctctcggcccagctcaagatcagcaccgccgaggccaaggagcagatggag
gtctacttcgaccgcttcggcggcatccgcgactacctcgccgacgtggtcgaccaggcc
cgcaaggtcggctacacccaaaccctgttcggccgccgccgctacctgcccgacctggac
tccagcaaccgccagcgccgcgagtccgccgaacgcatggccctcaacgcccccatccag
ggcaccgccgccgacatcatcaaggtcgcgatgatcaacgtgcagaacgcgattcgcgag
gcgggcctgcgctcgcgcatgctcctgcagatccacgacgaactcgtcttcgaggtcgcc
gacggcgaacgcgaggtcctggaggcactggcccgcgaccagatgtcggaggccatcgag
ctctcggtcccgctcgacgtgtccgtgggaaccggccgcagctgggattcggcggctcac
tga

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