Neotabrizicola shimadae: JO391_00305
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Entry
JO391_00305 CDS
T08148
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K08692
malate-CoA ligase subunit alpha [EC:
6.2.1.9
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00630
Glyoxylate and dicarboxylate metabolism
nsm00680
Methane metabolism
nsm01100
Metabolic pathways
nsm01120
Microbial metabolism in diverse environments
nsm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JO391_00305 (sucD)
09102 Energy metabolism
00680 Methane metabolism
JO391_00305 (sucD)
Enzymes [BR:
nsm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
JO391_00305 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QYZ70024
UniProt:
A0A8G0ZT82
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All DBs
Position
complement(69662..70561)
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AA seq
299 aa
AA seq
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MAILITEKTPVIVQGMSGRIGQFHAAEMIRHGTNVVGGVTPGKGGERLLDRPLFNTVREA
VEETGAEASLLFVPPPFAADAIMEAADAGIRTAVCVTDGIPSQDMMRVKRFLRRYPEARK
MRLIGPNCAGIITPGKGFMGIMPPHIYMPGRVGIVGRSGTLGYEAASQMKALGIGVSTSV
GIGGDPINGSSFRDILELFQQDPETDAVMMIGEIGGPQEAEAAAWAARNMTKPIVAYIAG
LSAPKGRKMGHAGAIISAFGESAQEKVEILAAAGITVAPNPSAMGETMARVLTTRRAAA
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcctgatcaccgagaagacccctgtcatcgttcagggcatgtcgggccgcatc
ggccagttccatgccgccgagatgatcaggcatggcaccaatgtcgtggggggcgtgacc
cccggcaagggcggcgagcggctgttggaccggccgctcttcaacaccgtgcgcgaagcg
gtcgaggagacgggcgccgaagcctcgcttctgttcgtgccgccgccctttgcggccgat
gcgatcatggaggccgcggatgccggcatccgcaccgccgtctgcgtgaccgacggcatc
ccctcgcaggacatgatgcgggtgaagcgctttctgcgccgctatcccgaagcccgcaag
atgcgcctgatcgggccgaattgcgcgggcatcatcacgcccggcaagggcttcatgggc
atcatgccgccccatatctacatgccgggccgggtgggcatcgtgggccggtcgggcacg
ctggggtatgaggcggcgagccagatgaaggcgctgggcatcggcgtatcgaccagcgtg
ggcatcggcggcgacccgatcaacggatcgtccttccgcgacatcctggagctgttccag
caggaccccgagaccgatgccgtgatgatgatcggcgagatcggcggcccgcaggaggcc
gaggcggccgcctgggccgcacgtaacatgaccaagcccatcgtcgcctatatcgccggg
ctgtcggcgcccaaggggcgcaagatgggccatgcgggggcgatcatctcggcctttggc
gaaagcgcgcaggaaaaggtcgagatcctggcggcagccggtattaccgtggcgccgaac
ccgtccgccatgggcgagacgatggcccgcgtcctgaccacccgccgcgcggccgcctga
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