Nocardia sputorum: IFM12276_67410
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Entry
IFM12276_67410 CDS
T09151
Name
(GenBank) urea carboxylase
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
nspu
Nocardia sputorum
Pathway
nspu00220
Arginine biosynthesis
nspu00791
Atrazine degradation
nspu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
IFM12276_67410
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
IFM12276_67410
Enzymes [BR:
nspu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
IFM12276_67410
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
RnfC_N
Dala_Dala_lig_C
Biotin_lipoyl_2
ATP-grasp_5
HlyD_3
HlyD_D23
LAL_C2
GCV_H
Motif
Other DBs
NCBI-ProteinID:
BDU03713
LinkDB
All DBs
Position
complement(7402571..7406182)
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AA seq
1203 aa
AA seq
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MSLEFDTVLVANRGEIACRIVRTARALGLKTVAVYSDADVSAAHVEMADVAVRLGPGPAA
ESYLRADLVVEAALTAGAGAIHPGYGFLSENADFATAVEQAGIAFVGPTPEQLRVFGDKH
TARTAARAVGVPLIPGSDLLESADHAVAEAERIGFPVMLKAVGGGGGIGMQACFGPDKVR
AAYERVQRIAAANFGSAGVFLERFVARARHVEVQLFGDGHGRVVSLGTRDCSLQRRNQKV
IEEAPAPGLGAELSERLLAASRELARSVGYRSAGTVEFVYDADSGAASFLEMNTRLQVEH
PVTEAVTGVDLVEWMLRLAGGDTSMVDEQPERGPAITGHAVEARVYAEDPGHDYRPSAGL
ITAAHFPDDVRVDTWVATGSEVSPYYDPLLAKVISTGESRTDAFAALRTALAETRIYGVQ
TNLPQVRRAAADGRVLRTEHTTTTLAEIRPVGRRIDVLRGGTMTTVQDYPGRIGLWEVGI
PPSGPMDDLSFTLANTAVGNPVGVPALECTLQGPQLRFSDTTVVCVTGAPAPVTVDGRPV
AMWEPVTVAAGALLDIGAPADTGLRTYLAVRGGIDAPLYHGSAATFTLGGFGGVTGKAVA
TGDVLGIASVDAGALGAPAAVPAGDRPTFTHDWQLAVGVGPQTAPAYFTDADMTQFCTHP
WRVGSHANRTGIRLEGPKPAWSRSDGGEAGLHPSNLHDNPYSVGALNVSGDTPILLGPDG
PSLGGFACPLTVVSAHRWRMGQLRPGDTVRFVPVDDDKAAALRASDGSRVPDLPTGSPAA
LRDRGVLGGIEASPDRPRVRYLRGGDDNVLVEYGEMVLDLGLRMRVHALSEALAGVRLPG
ILDVTPGVRSLHIHFDPEVLPHYRLLGTLAELEAELPATTDLVVPSRTIRLPLSFDDPSI
AEAIDRYRSGVRDTAPWLPSNTEFIRRINGLDSVDDVRATVFDAEYLVLGLGDVYLGAPL
AVPLDPRHRLVTTKYNPARTWTPSDAVGIGGKYLCVYGMASPGGYQLIGRTVPIWSSYRQ
SAPFEAGTPWLFRFFDRIVWEPVGAEQLLEYRAAAAAGRFDAEVSEGSFALADHLRLLRT
EAGAIAEFEARQAAAFEAEKDAWRAAGEFERGAVAPAAAPIHDPLAGLPADATVVTAPMI
GNVWRVEVEPGQRVTAGAAVAVLEAMKLELPVHSPAAGTVLKVLTTSGAKVEPGTPLVVI
GAD
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
gtgagtctggaattcgatacggtgctcgtcgccaatcgcggcgagatcgcctgccgcatc
gtgcggacggcccgggcactggggctgaagacggtcgccgtgtactccgatgccgatgtg
agcgccgcgcacgtcgagatggcggacgtcgccgtgcggctgggaccgggcccggcggcg
gagtcgtatctgcgggccgacctggtggtcgaggcggcgctgaccgccggagccggagcc
attcatcccggctacggctttctctcggagaacgccgatttcgccaccgcggtcgagcag
gcgggcatcgcgttcgtcgggccgacccccgagcagctgcgcgtcttcggggacaagcac
accgcgcgcacagcggcgcgcgcggtgggcgtaccgctcatcccgggcagcgacctgctc
gaatcggccgatcacgcggtcgcggaggcggagcggatcggttttcccgtgatgctgaag
gcggtcggcggcggtggcggcatcggcatgcaggcatgcttcggcccggacaaggtgcgc
gcggcctacgagcgggtgcagcgcatcgcggcggcgaacttcgggtcggcgggcgtcttc
ctggaacgtttcgtcgcgcgcgccaggcacgtcgaggtgcaactgttcggcgacggccac
ggccgcgtggtcagcctcggcaccagagactgctcgctgcaacgccgcaatcagaaggtg
atcgaggaggcgcccgccccgggtctcggcgcggagctgtcggagcgtctgctcgccgcg
tcccgggagctcgcccgttcggtcggataccgctcggccgggacggtggagttcgtctac
gacgccgacagcggcgccgcgtcattcctggagatgaacacccggctgcaggtcgagcat
ccggtcaccgaggcggtcaccggcgtcgacctggtggaatggatgctgcgcctcgccggc
ggcgacacctcgatggtcgatgaacagcccgagcggggaccggcgatcaccggtcacgcg
gtggaggcgcgggtctacgcggaagatcccggccacgactaccgcccgagcgcgggtctg
atcacggccgcgcacttcccggacgacgtccgggtggacacgtgggtcgccaccggctcg
gaggtcagcccgtattacgacccgctgctggccaaggtgatcagcaccggggagagccga
acggacgccttcgccgcactgcgcaccgcactcgccgagacccggatctacggcgtccag
acgaatctgccgcaagtccgccgagccgcggcggacggccgggtgctgcgcaccgagcac
accaccaccacgctggccgagatccgcccggtcggccgccgcatcgacgtgctgcgcggc
ggcaccatgaccaccgtgcaggactaccccggccggatcggcctgtgggaggtcggcatt
ccgccgtccggcccgatggacgacctctccttcaccctcgccaacaccgcggtcggcaac
ccggtcggcgtccccgcgctcgaatgcaccttgcagggcccgcaattgcgcttctccgac
accaccgtcgtgtgcgtgaccggcgcgcccgcgccggtgacggtggacggccgtccggtg
gcgatgtgggagccggtcaccgtggccgcgggcgcgttgctggacatcggcgcacccgcc
gacaccggcctgcgcacctatctggcggtgcgcggcggcatcgatgcgccgctctaccac
ggcagcgcggccaccttcaccctcggcggattcggcggtgtgaccggaaaggcggtggcg
accggcgacgtgctcggcatcgcctcggtggacgcaggcgcactcggcgcacccgccgcg
gtgccggcgggagaccggccgacgttcacccacgactggcagctcgcggtcggcgtcggt
ccgcagaccgcgcccgcgtacttcaccgacgccgacatgacccagttctgcacacacccg
tggcgggtcggcagccacgccaaccgcaccggcatccggctggagggcccgaaacctgct
tggtcgcgcagcgacggcggcgaggccgggctgcacccgtccaacctgcacgacaacccc
tacagcgtgggcgcgttgaacgtctccggtgacacgcccatcctgctcgggcccgacggc
cccagcctcggcggcttcgcctgcccgctcaccgtggtgtccgcgcatcgctggcggatg
ggtcagttgcgtcccggcgacaccgtgcggttcgtgccggtcgacgacgacaaggcggcc
gcgctgcgcgcgtccgacggcagccgcgtgccggatctgcccaccggttctcccgccgcg
ctgcgggatcgcggcgtcctcggcggaatcgaggcgtcaccggaccggccgcgggtgcga
tacctgcgcggcggcgacgacaacgtcctggtcgagtacggcgagatggtgctggacctc
gggctgcgcatgcgggtgcacgcgctgtccgaagccctcgcgggcgtccggctgcccggc
atcctcgacgtcacccctggcgtccgctccctgcacatccacttcgatcccgaagtgctg
ccgcactatcgactgctcggcacgctggccgaactcgaagccgagctgcccgccacgacc
gatctggtggtgccgagccgcaccatccggttgccgctgtcgttcgacgacccgtccatc
gcggaagcgatcgaccgttaccgcagcggtgtgcgcgacaccgcgccgtggctgccgtcg
aacaccgagttcatccgccgcatcaacgggctcgacagcgtcgacgacgtgcgcgccacg
gtcttcgacgccgagtatctggtactggggctcggtgacgtgtatctcggtgcgccgctg
gcggttccgctcgatccgcggcaccgcctggtcaccaccaaatacaacccggcgcgtacc
tggaccccgtcggatgccgtcggcatcggaggcaagtacctgtgcgtctacgggatggcc
tcgccaggcggttaccagctgatcggccgaacggtgccgatctggtccagctatcggcag
tccgcgccgttcgaggcgggcacgccctggctgttccggttcttcgatcgcatcgtctgg
gaaccggtcggcgcggagcagttgctcgaataccgcgccgcggccgccgcgggcaggttc
gacgcggaggtgagcgagggcagtttcgcgctcgccgaccatctgcggttgctgcgcacc
gaggcaggcgcgatcgccgagttcgaagccaggcaggccgccgcgttcgaggcggagaag
gacgcgtggcgggcggcgggcgagttcgaacgcggcgccgtcgcgcccgccgccgcaccc
atccacgacccgctggcagggctgcccgccgacgcgaccgtcgtcaccgcgccgatgatc
ggcaatgtctggcgggtggaagtcgagcccgggcagcgggtcacggcgggtgcggcggtg
gccgtcctggaggcgatgaagctcgaactacctgtgcacagcccggccgcgggcaccgtg
ctgaaggtcctgaccacgtccggcgccaaggtggagccgggaacgcccctagtagtgatc
ggagccgactga
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