Nocardia seriolae: NS506_06380
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Entry
NS506_06380 CDS
T04599
Symbol
gcpE
Name
(GenBank) (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
nsr
Nocardia seriolae
Pathway
nsr00900
Terpenoid backbone biosynthesis
nsr01100
Metabolic pathways
nsr01110
Biosynthesis of secondary metabolites
Module
nsr_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
nsr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NS506_06380 (gcpE)
Enzymes [BR:
nsr01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
NS506_06380 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
NS506_06380 (gcpE)
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Motif
Pfam:
GcpE
MR_MLE_C
zf-RING_7
Motif
Other DBs
NCBI-ProteinID:
APB00416
UniProt:
A0A1I9ZET2
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All DBs
Position
complement(6702859..6704016)
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AA seq
385 aa
AA seq
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MSSAIALGMPAAPAAVLAPRRKTRQLMVGNVGVGSEFPVSVQSMTTTKTHDVNATLQQIA
ELTASGCDIVRVACPRQEDADALATIARKSQIPVIADIHFQPRYIFAAIDAGCAAVRVNP
GNIKEFDGRVKEVAKAAGDAGIPLRIGVNAGSLDKRLLEKYGKATPEALVESALWEASLF
EEHGFGDIKISVKHNDPVIMVEAYRQLAAKCDYPLHLGVTEAGPAFQGTIKSAVAFGALL
SEGIGDTIRVSLSAPPAEEIKVGTQILQSLNLRPRKLEIVSCPSCGRAQVDVYTLANEVT
AGLEGMEVPLRVAVMGCVVNGPGEAREADLGVASGNGKGQIFVKGEVIKTVPEHLIVETL
IEEAMRLADEMGDEAGTGAPVVTAG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagtgccatcgctttggggatgccggccgcaccggcggccgtcctcgcaccgcgg
cgcaagacgcgccagctgatggtgggcaatgtcggagtggggagcgagttccccgtctcg
gtccagtcgatgaccaccaccaagacccatgacgtcaacgccaccctgcagcagatcgcg
gagctgaccgcgtccggctgcgacatcgtgcgcgtggcctgtccgcgtcaggaggacgcg
gacgcgctggccaccatcgcgcgcaagtctcagatcccggtgatcgccgacatccacttc
cagccgcgctacatcttcgccgccatcgacgcgggatgcgctgcggtgcgcgtgaatccg
ggcaatatcaaggaattcgacggccgcgtcaaggaggtcgccaaggcggccggggacgcg
ggcatcccgctgcgcatcggcgtcaacgcgggctcgctcgacaagcggctgctggagaag
tacggcaaggccacccccgaggcgctcgtggagtccgcgctatgggaggcgagcctgttc
gaggagcacggcttcggcgatatcaagatctcggtcaagcacaacgacccggtgatcatg
gtcgaggcctaccgtcagctcgccgccaaatgcgattaccccctgcacctgggcgtgacc
gaggccggtcccgccttccagggcaccatcaagtcggccgtcgccttcggcgcgctgctc
tccgagggcatcggcgacaccattcgcgtctccctctcggccccgcccgccgaggagatc
aaggtcggcacccagatcctccagtcgctcaacctgcgcccccgcaagctggagatcgtc
tcctgcccgtcctgcggccgcgcccaggtcgacgtctacaccctggccaacgaggtcacc
gccggtctcgaaggcatggaagtcccgctgcgcgtggcggtcatgggctgtgtcgtgaac
ggccccggcgaggcccgcgaggccgacctgggcgtcgcctccggcaacggcaagggccag
atcttcgtcaagggtgaggtcatcaagaccgtccccgaacacctcatcgtcgagaccctc
atcgaggaggccatgcgcctcgccgacgaaatgggcgacgaagcgggcaccggcgccccg
gtcgtcaccgcgggctga
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