Notechis scutatus (mainland tiger snake): 113414722
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Entry
113414722 CDS
T09026
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113414722 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nss04090
]
113414722 (VCAM1)
04091 Lectins [BR:
nss04091
]
113414722 (VCAM1)
CD molecules [BR:
nss04090
]
Proteins
113414722 (VCAM1)
Lectins [BR:
nss04091
]
I-type lectins (Siglecs)
113414722 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
C2-set
I-set
V-set
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
113414722
NCBI-ProteinID:
XP_026527508
UniProt:
A0A6J1UG92
LinkDB
All DBs
Position
Unknown
AA seq
413 aa
AA seq
DB search
MSFNPVLAIKTSRVTLARSPGDAFPSDPVIELKSPLILGQPASVTCRVPEVYPSEQLMIT
LIKGKVTAEKEFFQDPHTKSLQTKNLKVDFIPTEEDFGKEIICVAELSLEDMVLAPRQAT
HVMEINYGPRNTKIVAFPSNTVLEGEALILTCLTESHPQASFVWKKQLPDGLAQNFAEKY
NLSIPNPQPSDSGTYTCEVTNEVTSVVERTSLYISVQASVFSTAASTLTTPSETTVLSTP
SETTVLTETTALTTPSETTALTTPSETKVLTTPSETTVSVTSDAASETTISVISRATLKT
FFSTASDIATPELITMSASDTAPKIITSMTSHAALKNNTAVHLVDASTDDRNNTEEIIII
ARVEELDSVTPVIIVVSCLSIVAGPAAAIFIYIFRKMKINGSYSLADSLKPNV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgagttttaatcctgttttagccatcaaaaccagcagggtgaccttggcccgatcacca
ggagatgctttccccagtgatccggttattgagctcaaaagccctctcattcttgggcaa
cctgcttctgtcacctgtcgtgtccccgaggtctatccttctgagcagttgatgatcact
ttgatcaaaggaaaagtaactgctgaaaaagagttttttcaagaccctcatacaaaatca
ttgcagaccaagaacctgaaggtggatttcattcctaccgaggaagattttgggaaagag
attatatgtgtagctgagctgtctttagaggacatggttctggcgcccaggcaggctacg
catgtgatggaaataaactatggcccacggaatactaaaattgtggcatttccaagcaac
actgtactagaaggagaagcactgatacttacctgcttgactgaaagtcatcctcaggct
agttttgtctggaagaagcagcttcctgatggactggcccagaattttgcagaaaagtac
aacctctctatcccaaatcctcagccctctgactctggaacctatacctgtgaagtcacc
aatgaagttacaagtgtagtggagagaacatcgctatatatttctgtacaagcttcagtc
ttttcaacagccgcttcaacattaaccaccccatctgaaacaacagtattaagtactcca
tctgaaacaacagtattaactgaaacaacagcattaaccaccccatctgaaacaacagca
ttaaccaccccatctgaaactaaagtattaaccaccccatccgaaacaacagtgtctgtt
acatcagatgcagcatcagaaactacaatatcggttatatctcgtgcaacactgaaaacc
tttttctctacagcatcagatatagcaacaccggagttgattacaatgtctgcatcagat
acagcacccaaaataattacctctatgacatcacatgcagcactgaaaaacaatacagct
gtgcacctggtggatgcttctactgatgacagaaataatacagaagagatcataataatt
gccagagttgaagagctggattccgtgactcctgtaatcatcgtagtttcttgtttatcc
atagtagcaggtcctgcagctgccatatttatttacatttttagaaagatgaaaataaat
ggatcctatagtcttgccgactcgcttaaaccaaacgtataa
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