Notechis scutatus (mainland tiger snake): 113415345
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Entry
113415345 CDS
T09026
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss04010
MAPK signaling pathway
nss04210
Apoptosis
nss04218
Cellular senescence
nss04620
Toll-like receptor signaling pathway
nss04621
NOD-like receptor signaling pathway
nss04622
RIG-I-like receptor signaling pathway
nss04623
Cytosolic DNA-sensing pathway
nss04625
C-type lectin receptor signaling pathway
nss04920
Adipocytokine signaling pathway
nss05132
Salmonella infection
nss05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113415345 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
113415345 (NFKB1)
04218 Cellular senescence
113415345 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
113415345 (NFKB1)
04621 NOD-like receptor signaling pathway
113415345 (NFKB1)
04622 RIG-I-like receptor signaling pathway
113415345 (NFKB1)
04623 Cytosolic DNA-sensing pathway
113415345 (NFKB1)
04625 C-type lectin receptor signaling pathway
113415345 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
113415345 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113415345 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
113415345 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nss03000
]
113415345 (NFKB1)
Transcription factors [BR:
nss03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
113415345 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
CzcE
Motif
Other DBs
NCBI-GeneID:
113415345
NCBI-ProteinID:
XP_026528490
Ensembl:
ENSNSUG00000012629
UniProt:
A0A6J1UDX5
LinkDB
All DBs
Position
Unknown
AA seq
975 aa
AA seq
DB search
MADENSYLLGMGDHQVYAMEHYPLGMNQLYNNASMISTDLPLRPTDGPYLQIVEQPKQRG
FRFRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYAGPAKVIVQLVTNGKHVHLHAHSLV
GKHCEQGVCTVNAGPKDMVVGFPNLGILHVTKKKVLDTLEMRMIDACKKGYNPGLLVHPD
LNYIQVEGGEERQLTERERDIIRQAAHQQTKEMDLSVVRLMFTAFLPDSTGSFTRRLQPV
LSDPIYDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQIRFYEEDESGGVW
EGFGDFSPTDVHRQFAIVFKTPKYRDVNITKAASVFVQLRRKSDLETSEPKPFLYYPEIK
DKEEVLRKRQKLMPNFSDSFGGSGAGAAGGGMYGGVGGGGGGSSAGSGYGYPPYGFSSYG
AMHFHSSTNKSGAGMKHGVSNGMPKRENQMCCDKKHNEKLKEKVDIEDKSKTSTGSVSER
EEDTSANIHLQDAFFLEKAMELAKRHANALFDYAVTGDVKMLLAVQRPLTTIQDENGDNV
LHLAIIHLHMELVKNLLEVIANMNAAAVLNVRNDLYQTPLHLAVITRQAGIVRALLGAGA
DVNLLDRHGNSVFHLAAQQGDEVALSMLLQHKEASVMRDLPNGDGLTILHLAVIANSMPC
LRLLLAAGVDVNIQEQKSGRTALHLAIEQGNISMAGCLLLEGDAFVDSVTYDGTTPLHIA
AGRGSTKLAALLKAAGADPHIENFEPLFEEEDIKDNESEKIIPGTTPLDMATSWEVYDIL
SSKLCKSKAASEHLLIQGNMKDLNEDVKLQLYKLLEVPDLTKSWSMLAQKLGLGILNNAF
RLSPSPSKTLLDNYEVSGGTVKELIDALREMDYPEAVEIIEKRITSSRQSNQEKTKNDVL
PLCDLPSPRTEQADEICNFKFQDTESICDSGVEISLHKLSFTYSESFTNKTSINLKKKAS
GYGQDNSLQGKIEVT
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagaattcttacctcttgggaatgggcgatcatcaggtatatgcaatggaa
cattaccccttggggatgaatcagctgtacaataacgcaagcatgatttcaacggatctg
ccacttcgcccaactgatgggccatatcttcaaatagttgaacaacctaaacagaggggc
tttcgtttccgctatgtttgtgaaggaccatcccatggtggacttcctggagcttctagt
gaaaagaacaagaagtcttacccacaagttaaaatctgcaattatgctggacctgcaaaa
gtaatagtgcagttagtcacaaatggaaaacatgtccacttgcacgctcacagcttggta
ggaaaacactgtgagcagggagtttgcacagtaaatgcaggaccaaaggacatggtagta
ggatttccaaacctgggaatattacatgttacaaagaaaaaagtattagacacactggaa
atgcgcatgattgatgcatgtaaaaaagggtacaatccaggactcctcgttcaccccgat
ctcaattatatacaagtggaaggtggagaggagaggcagctaacagaacgagaacgagat
atcattcgtcaggcagcacatcagcagactaaggagatggatctcagcgttgtacgtctc
atgttcactgcattccttcctgatagcactggtagctttacaaggagacttcagcctgtc
ttgtctgaccctatatatgacagcaaagctccaaatgcatccaatttaaaaattgtacgg
atggatcggactgcaggctgtgtaacagggggagaagaagtttacctactttgtgacaaa
gtccaaaaggatgatattcaaatccgtttttatgaagaagatgaaagtggtggtgtctgg
gaaggttttggagacttttcacctactgatgtgcacagacagtttgcaatagtattcaaa
acaccgaagtatcgagatgtcaacatcacaaaagcagcatctgtatttgttcaattacgg
cgaaaatcagatctagagaccagtgaaccaaaaccttttctgtactatcctgaaatcaaa
gataaagaagaagtgctaaggaaacgacagaaactcatgccgaacttctccgatagtttt
ggcggaagtggcgcaggtgctgcaggaggtgggatgtatggtggagtcggaggaggagga
ggtggcagcagtgctggatcaggatatgggtacccaccatatgggttttccagttacggt
gcaatgcatttccattccagcacaaacaaaagtggtgcaggaatgaaacacggagtctca
aatggcatgcccaaaagagagaatcaaatgtgctgtgacaaaaaacacaatgagaaatta
aaagaaaaagtagacattgaagataaaagcaaaaccagcactggctcggtttctgaaagg
gaagaagatactagtgccaacattcatttacaagatgccttctttttggaaaaagccatg
gaacttgctaagcgacacgctaatgctctttttgactatgcagtcacaggagatgtaaag
atgcttctggcagtacagcgccccctgacaaccattcaggatgaaaatggggataatgtc
ctccacttggcaattattcaccttcatatggaactggtgaagaaccttttagaagtaata
gcaaatatgaatgctgctgctgttctcaatgtgagaaatgacctttaccagactccttta
cacttggctgttataacaaggcaggcgggaattgtgagagccttgcttggggctggggct
gacgtgaacctcttggaccgccatgggaactctgtcttccatttggcagctcagcaagga
gatgaggtggccttaagtatgttgcttcaacataaagaggcatctgtgatgagagacctt
cccaatggggatggtctgacaatccttcacctagctgttatagcaaacagtatgccgtgt
ctcagactacttcttgctgctggtgttgatgtcaatatccaggaacagaaatctggaagg
acagctttgcacctggctattgaacaaggaaatatttccatggcaggttgccttctactt
gagggagatgcatttgtggacagcgttacttatgatggaaccaccccacttcatatagca
gctggaaggggatctacaaaattggcagcccttctcaaagcagcaggtgcagatccccac
attgaaaacttcgagccgttgtttgaagaggaagatataaaagataatgaaagtgaaaaa
attatacctgggacaactcctctggatatggcaaccagctgggaggtgtatgacatcttg
agtagcaaactttgtaagtcaaaggcagcttctgagcatcttctgattcaaggcaatatg
aaagacctgaatgaggatgttaaattacagctgtacaaattacttgaagttcctgatctg
accaaaagctggtccatgttggcacaaaagctcgggctagggatattaaacaatgccttt
cggttgagtccttctccatcaaaaactctactggataattatgaggtttctggtggaaca
gtaaaagagttgattgatgccctcagagaaatggattatccagaggctgttgaaattatt
gagaaaagaattacttcatcaagacagtcaaaccaggagaaaaccaaaaatgatgttctt
ccattatgtgatttaccttctcctaggacagaacaagcagatgaaatatgtaatttcaaa
ttccaggatactgaaagcatttgtgacagtggagtagagatttcgcttcacaaacttagt
tttacatattctgaatcttttaccaacaagacatccataaatcttaagaaaaaggcttca
ggctatggacaggacaactcgttacaaggcaaaattgaagtaacttaa
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integrated database retrieval system
