Notechis scutatus (mainland tiger snake): 113422656
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Entry
113422656 CDS
T09026
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113422656 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nss03019
]
113422656 (CLP1)
Enzymes [BR:
nss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
113422656 (CLP1)
Messenger RNA biogenesis [BR:
nss03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
113422656 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
MMR_HSR1
ATP_bind_1
TniB
AAA_22
AAA_16
AAA_18
CbiA
Motif
Other DBs
NCBI-GeneID:
113422656
NCBI-ProteinID:
XP_026539562
Ensembl:
ENSNSUG00000017008
UniProt:
A0A6J1V8F5
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MAEETGDEKKLVAKFELERETELRFEVEASQTVQLELMTGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSVQLTGRTEVAYISKDTPMLLYLNTHTALEQMRWQAEREDERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSISIPGTMGALYIERPADVEEGFSV
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASISGCIINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREFRDDR
IREYFYGFRGCFYPHAFDVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTADGTDENISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLLIMDIR
FMDLK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagagactggagatgaaaagaaactggttgccaagtttgagctggagagggag
actgaactccgctttgaagttgaggcctcacaaactgtccagctggaacttatgacaggc
atggctgaaatctttggaactgagttgacacggaacaagaaattcaccttcgatgctggt
gctaaagttgctgtatttacctggcatggttgttctgtgcaactaactggtcggactgaa
gtagcctatatctccaaagatacacccatgcttctctacctcaacacacacacagctctg
gagcagatgcggtggcaggctgagcgtgaagatgagcggggacctcgggtgatggtagtg
ggccccacagatgtaggcaagtcaacggtctgccgcctgctattgaattatgctgtgcgt
cttggacgccgacccacatttgtggaactggatgtaggccagggctcaatttcaatccca
gggactatgggagcactctatattgagcgacctgcagatgttgaagaaggattctctgtt
caagcccccctagtttatcattttgggtccaccacacctggcacaaacatcaaactctat
aacaaaatcacatctcgtttggctgacgtgtttaatcaacgctgtgaagtgaaccgcaga
gcttcaatcagtggctgtatcatcaatacttgtggctgggtgaagggatctggatatcag
gcacttgtacatgctgcttctgcttttgaagttgatgttgttgtagtgttggatcaagaa
cgcctctacaatgaactgaaacgagatctgcctcactttgttcgaactgtgctacttccc
aaatcaggtggagtagtagagcgctctaaagattttcggcgggagtttcgtgatgaccgc
atacgtgaatacttctatggcttccgaggatgtttctatccacatgcttttgatgtcaag
ttctctgatgttaagatatataaagtgggagctcccactatccctgactcatgtctgccc
ctgggcatgtcacaagaagacaatcaactcaagctagtcccagttacacccggtcgtgac
atggttcatcatctgttaagtgttagtactgctgatggcactgatgagaacatctctgag
accagtgtggctggtttcattgtggtaactggagtagacctggaacgccaagtcttcaca
gtgctttcaccagcaccacgcccattgccaaagaatttcctgctcatcatggacattcgt
ttcatggatctcaagtag
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integrated database retrieval system
