Notechis scutatus (mainland tiger snake): 113422954
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Entry
113422954 CDS
T09026
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nss
Notechis scutatus (mainland tiger snake)
Pathway
nss03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nss00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113422954 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nss03021
]
113422954 (POLR1B)
Enzymes [BR:
nss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113422954 (POLR1B)
Transcription machinery [BR:
nss03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
113422954 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
113422954
NCBI-ProteinID:
XP_026539934
Ensembl:
ENSNSUG00000015977
UniProt:
A0A6J1VIY4
LinkDB
All DBs
Position
Unknown
AA seq
1132 aa
AA seq
DB search
MDAAGKWRNLPNSPSLKHLTASDYGLPREQQRPALQDIARAHIESFNYAVSEGLNRAAQD
IPPLEFAFKNDRITLAFSGATISPPMVPKGSICKELKVYPAECRGRRSTYRGKLTGDISW
SVNGIPKGIIKQTLGNIPIMVKSKFCHLHGLSPKALIQHHEEEEEMGGYFIINGIEKVIR
MMIMPRRNFPLAMIKPKWKSRGPGYTQYGVSMHCVRDEHTSVNMTLHYLDSGSVMVNFIY
QKELFFIPLGFLLKALVGFSDFQIFQELVKGKEDDTFYKNCVSQMLRLVTEDGCVTQKQV
LIFLGQHFRVKLNLPDWYSNERVGEFLFNQCICIHLKTKAEKFYLLCLMTRKLFTLSKEG
CMEDNPDSLMNQEVLTSGQLYLMFLKEKMETWLHSVKLALDKKAQRSNVTITSENMIKIL
GMGIDLTRMLEYLLATGNLRSKSGLGLLQASGLCVIADKLNFFRYLSHFRCVHRGAAFLK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTAPCEIVTQTFNTVSLLPLLCSLGVT
PVDGVPSQPYAECYPVTLDGALVGWIEKDQAPDLVETFRHFKAMQEKKIPGWTEVVLIPM
TGKPSLYPGLFIFTTPCRMMRPVQNLALGKEEWIGTMEQVFMNIAVSKDEIQPGLTTHQE
LFPYSMLSVVACFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTFPYRSDDKLYRLQTPQSP
LVRPSIYDYYNMDSYPIGTNAVVAVISYSGYDMEDAMILSKSSWERGFAHGSIYKTERID
LGEKVKQGEDNLVFGIGHDKPVQSLDPDGLPHIGAILQYGDPYYSYVNLNTGESFVTYHK
NKETYIVDNIKVCSNDTGTGRFKCVCITFRVPRNPTIGDKFASRHGQKGILSRLWPAEDM
PFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSASLHGFCHDATPFTFSEENSAVEYF
GKLLKAAGYNYYGTERMYSGVSGIELEADIFIGLVYYQRLRHMVSDKFQVRTTGARDKVT
NQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVDCGSLLSPLLK
APPAWSTTCARQYVCASCDQSSTIETIAVPYVFRCFVAELAAINVKVKLDVQ
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgcgggcaagtggaggaatttgcccaacagtcccagcctcaagcatcttacg
gcgtcggactacggcctgcccagagagcagcagaggcctgcccttcaggatattgcacgg
gctcatattgagtcgttcaactacgctgtaagcgaaggactgaaccgtgccgcgcaggat
attcctcctttggagtttgcttttaagaatgatcggattactttggccttttcaggggcc
accatcagccctcctatggtaccaaaagggagtatatgtaaagaactgaaagtttatcca
gcagaatgtcgaggacgtagaagtacctaccgtgggaaactgactggtgatatcagctgg
tcagtgaatggaattcctaaaggaattattaaacagacccttgggaatattccaattatg
gtgaaatctaaattctgtcatctccatggcctttctcccaaagcacttatccaacaccat
gaagaagaagaggaaatgggtggttatttcataattaatggaatagaaaaggtgataaga
atgatgattatgcctcggcgcaactttcctcttgcaatgataaaaccaaaatggaaatct
agaggcccaggctacacacaatatggggtctccatgcactgtgttagagatgagcataca
tctgttaacatgaccttacactaccttgatagcggttcggtgatggtgaacttcatctat
cagaaggagctgttttttatcccgctgggatttctccttaaggcattggttggtttctca
gactttcagattttccaagaactggttaaagggaaagaagatgatacattttataagaac
tgtgtctctcaaatgctgaggctggttacagaggatggctgtgtgacccagaagcaagtg
ctaatcttcttagggcagcacttcagagtaaaattgaaccttcctgattggtattccaat
gagcgggttggagagttccttttcaaccagtgcatctgcatacatttgaaaacaaaagct
gagaaattctacttgctttgtctcatgacacgaaagctttttactttatccaaagagggt
tgcatggaggacaatcctgacagcttaatgaatcaagaagtgctcacctcaggacaactt
tacctcatgtttttaaaggagaagatggaaacttggctacactcagttaaactagcatta
gataagaaagctcagaggtcaaatgtaacaattacttcagaaaacatgataaagattctt
ggcatgggaatagatctcacccggatgcttgaatatctcctggcaactggtaacctgcgc
tcaaagtcaggtttgggcttgctgcaagcatcaggtctatgtgtgatagcagacaagctg
aacttcttccgctacctctcccacttccgttgcgtgcacagaggagctgcttttctgaaa
atgagaaccacaacagtgcgcaagctgttgccagagtcctggggcttcctctgtcctgtc
cacacaccagacggcgagccttgtggcttgatgaaccatatgacggccccctgtgaaatc
gtaacccagactttcaacactgtatctctgctaccgttgctttgctctttaggtgtcacc
ccagttgatggtgtaccaagccaaccttatgctgaatgttatccagttacattagatgga
gctctggtgggctggatagaaaaggatcaggctcctgatcttgtggagactttcagacac
ttcaaggcaatgcaagaaaagaagattccaggttggacagaagtggtgctcattccgatg
acagggaaacccagtctctacccaggactttttattttcactaccccttgtaggatgatg
cgtcctgtacaaaacttggctttgggaaaagaagaatggattggcacaatggaacaggta
ttcatgaacattgccgtgtccaaggatgaaattcaacctgggttgaccactcatcaggag
ctttttccctatagcatgctaagcgtggtggcatgtttcattcctttctctgatcacaat
caaagtccaagaaacatgtaccagtgtcagatgggtaagcagacaatgggttttccactt
ctcaccttcccgtatcgatctgatgacaaactataccggcttcagactcctcaaagccca
ttagttcggccatccatatatgattattacaatatggactcttatcccattggaacaaat
gccgttgttgctgtgatctcctatagtggttacgatatggaagatgcaatgatcctgagc
aagtcttcttgggagaggggatttgcacatggcagcatctacaagacagaacgtattgat
cttggagaaaaagtaaaacaaggagaagacaatctagtgtttgggattgggcatgataaa
cctgtgcagagtttggaccctgatggcctgccccatattggagctatacttcaatatgga
gatccttactatagctatgtgaatctcaacacaggggaaagctttgtgacctaccataag
aataaggaaacttatattgtagataacatcaaggtgtgcagcaatgatactggaactgga
agattcaagtgtgtatgcatcactttcagagtcccccggaatccaacaattggggacaaa
tttgccagccgtcatgggcagaaaggcatcttgagccgattgtggccagctgaagacatg
ccctttaccgaaagtggaatggtgccggatatcctcttcaatcctcatggttttccatcc
agaatgaccattggcatgctgattgagagcatggcaggaaaatctgcctcacttcatgga
ttctgtcatgacgcaaccccatttacgttttctgaagagaattccgctgtggaatacttt
ggcaagctgctgaaggctgccggctataattactatgggacggagaggatgtacagtggg
gtttctggaatagagcttgaagcagacatttttattggtcttgtgtactatcagcgcctg
aggcacatggtctctgacaaatttcaggtgaggactacaggggcccgcgataaagtcacc
aaccagcccattggaggaaggaacgttcagggcggcatccgctttggggagatggagcgg
gatgctctgttggctcatggcacgtcctttttgctgcacgatcgtctcttcaattgctca
gatcgttcagtggcccacgtttgtgttgactgtggtagtctcctctcacctctcctgaaa
gctccaccagcctggtccaccacttgtgcccggcaatacgtttgtgcctcttgtgaccaa
agtagcaccattgaaacaattgctgtcccttatgtcttccgctgctttgtggcagaattg
gctgctattaatgtcaaagtgaaacttgatgtacagtaa
DBGET
integrated database retrieval system
