KEGG   Neomonachus schauinslandi (Hawaiian monk seal): 110578142
Entry
110578142         CDS       T08474                                 
Symbol
POLR2F
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC2
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
nsu  Neomonachus schauinslandi (Hawaiian monk seal)
Pathway
nsu03020  RNA polymerase
nsu03420  Nucleotide excision repair
nsu04623  Cytosolic DNA-sensing pathway
nsu05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:nsu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110578142 (POLR2F)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110578142 (POLR2F)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110578142 (POLR2F)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    110578142 (POLR2F)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsu03021]
    110578142 (POLR2F)
   03400 DNA repair and recombination proteins [BR:nsu03400]
    110578142 (POLR2F)
Transcription machinery [BR:nsu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110578142 (POLR2F)
  RNA polymerase III system
   RNA polymerase III
     110578142 (POLR2F)
  RNA polymerase I system
   RNA polymerase I
     110578142 (POLR2F)
DNA repair and recombination proteins [BR:nsu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110578142 (POLR2F)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 110578142
NCBI-ProteinID: XP_021543333
EnsemblRapid: ENSNSCG00000009500
UniProt: A0A2Y9GVV8
LinkDB
Position
5:complement(10556912..10567470)
AA seq 127 aa
MSDNEDNFDGDDFDDVEEDEGLGDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
NT seq 384 nt   +upstreamnt  +downstreamnt
atgtcagacaacgaggacaattttgatggtgacgactttgatgatgtggaggaggatgaa
gggctaggtgacttggagaatgccgaggaggagggccaggagaatgttgagatcctcccc
tctggagagcgaccacaggccaaccagaagcgaatcaccacaccgtatatgacgaagtat
gagcgagcgcgtgtactcggcacccgcgccctccagatcgcgatgtgtgcccctgtgatg
gtggagctggagggggagacagatcccttgctcatcgccatgaaagagctcaaggcccga
aagatccccatcatcattcgccgctacctgccagatgggagctatgaagactggggggta
gacgagctcatcatcaccgactga

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