Neomonachus schauinslandi (Hawaiian monk seal): 110594326
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Entry
110594326 CDS
T08474
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
nsu
Neomonachus schauinslandi (Hawaiian monk seal)
Brite
KEGG Orthology (KO) [BR:
nsu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nsu04040
]
110594326 (SCN11A)
Ion channels [BR:
nsu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
110594326 (SCN11A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
110594326
NCBI-ProteinID:
XP_021561538
EnsemblRapid:
ENSNSCG00000019830
UniProt:
A0A2Y9IC76
LinkDB
All DBs
Position
1:147809982..147906759
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AA seq
1771 aa
AA seq
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MDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKKCKDQTASEPQPRPQLDLKVSR
KLPKLYGDIPHELIARPLEDLDPFYKNHKTFMVLNKKRTIYRFSAKRALFIFGPFNPIRS
LAIKISVHSVFSMFIICTVIINCVFMATVYGKENSNIDTDNAEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSVVIVTAFATYIPEARESIFSLSSLRTFRVFRALKAISVVS
GLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCLHNDCRNIDNPDDN
CFEKKNSSEFRMCGIWMGNSACSENFQCTHTKRNPDYNYTNFDNFGWSFLAMFRLMTQDS
WEKLYQQTLRASGLYSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEKM
FQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGKRKRKSFFLRDSGKDQPP
GSDSDEDSTKKPHILEQTKRLSQNLSVDYFDEHRDPFQRQRALSAVSILTITVQEQEKSQ
EPCLPCGGNLASKYLVWNCSPQWVCIKKALRTVMTDPFTELAITICIIINTIFLAMDHYN
MRRSFDSMLHIGNLVFAGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFADVMNST
VAGKKRSLLFFRPLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVV
GMQVFGSKFNSIKSNKTSCVPTAPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQET
NQALCIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLGGESKKTKVQLALDRFRRA
FCFVIHTLQHFCHKWCRSQNLPRQKEVTGGPAAKSKDIIPLVTEMKKGPETREQHDRTWL
APLAEEEDGFESPGENNAQHVTQPEAGKQAFELHQVTKKSISPGAQSVEIDVFSEDDICL
SEKDPQKKCDTTSVLSECSTVDPQDPFGWVPEMIPKKEPERCFPKGLGHCFPCCAMDKRK
SPWIIWWNLRKTCYQIVKHSLFESFIIFVILLSSGALVFEDVHLEKRPNIQALLNCTDHI
FTYIFILEMGLKWVAFGFGKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRALRPLR
ALSQFEGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGNFGRCINKTDINSV
INYSTVASKTECEGGNLTWVTLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGKDL
QPGFEEKPENYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKISDEDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPLNKCQGLVFDLVTSQVFDIIIIILIFLNMVSMMAESDDQSEAT
KLILERLNLAFVVIFTIECLTKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALENQQH
IPFPPTLFRVVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIF
GMSCFCKVKEEHGIDDIFNFKTFVGSILCLFQITTSAGWDALLKPMLQSKDSCNPNLDSR
HLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEKFD
PEATQFIKYSALSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFTTRVL
GDSGGLDSMKMMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAVIQKAFRKYRLKMSTC
ALEDRPRSPLHTLCNGDLSSSGVAEGKVHYD
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaggtgctacccagtgatctttccagatgagcggaatttccgtcccttcact
tctgacactctggctacaattgagaagaggattgccatccaaaaggagaaaaagaagtgc
aaagaccagacagcatcagaaccccagcctcgacctcagcttgacctaaaggtctccagg
aagttgcccaaactctatggtgacattccccatgagctgatagcaaggcccctggaagac
ttggacccattctacaaaaatcataagacatttatggtgttgaacaaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcatttttgggcctttcaatccaatccgaagt
ttagccatcaaaatctcggtccattcagtgttcagcatgttcatcatctgcaccgtcatc
atcaactgcgtgttcatggccactgtctatgggaaggaaaacagcaatatagataccgac
aatgctgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggca
agaggttttattctggatgagttttcttttcttcgagatccatggaactggctggactcc
gttgtcattgtaacagcgtttgcaacatacataccagaagccagggaaagcatcttcagt
ctgtcatccctgcgtaccttccgagtgttcagagctttgaaagcaatttcagtggtttca
ggtctgaaggtcattgttggggccttgctgcgctctgtgaagaagcttgttgacgtgatg
atcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatggga
agtctgaaccagagatgtctccataatgactgtaggaatatcgataaccctgatgacaat
tgctttgaaaagaaaaattcctctgaattcagaatgtgtggcatctggatgggtaacagt
gcctgttctgaaaattttcaatgcacacacaccaaaaggaatcctgactataattatacc
aattttgacaactttggctggtcttttcttgccatgtttcggcttatgacccaagattcc
tgggagaagctttatcaacagaccttgcgtgcctcagggctctactcagttttcttcttt
gtggtggtcatcttcctgggctctttctacctgattaacttaaccctggctgttgtcacc
atggcttatgaggaacagaacagaaatgtagctgctgagacagaggccaaggagaagatg
ttccaggaagcccagcggctactgaaagaggagaaggaggctctggttgccatgggaatt
gacagaagttcacttaattcccttgaagcatcatctttttccccaaagaagagaaagctt
tttggtaaaaggaaaagaaagtccttttttttgagagactctgggaaagaccagcctcca
ggatcagattctgatgaagattccacaaaaaagccacacatcctagagcaaaccaaacga
ctatcccagaatctgtcagtggattacttcgatgagcacagggaccccttccaaagacag
agggccctgagcgcggtcagcatcctcaccatcaccgtgcaggaacaagaaaaatcacag
gagccttgcctcccatgtgggggaaacctggcatccaaatacctcgtgtggaactgtagc
ccccagtgggtgtgcattaagaaggccctgagaaccgtgatgactgacccatttactgag
ctggccatcaccatctgtatcatcatcaacactatcttcttggccatggatcattacaac
atgcgccggagttttgattctatgttgcatatagggaatttggtttttgctggcattttc
atggcagaaatgtgcctaaaaattattgcacttgatccctacaactactttcgccgaggc
tggaacatttttgacagcattgttgctcttctgagttttgcagatgtgatgaacagtaca
gttgcagggaaaaaaagaagcctgctgtttttccgtcccttaagagtgctgagagtcttc
aagttagccaaatcctggccaactttaaacacactgataaaaataattggccactccgtt
ggagccctgggaaacctgaccgtggtcctggctattgtggtctttattttctcagtggtt
ggcatgcaggtctttggctctaaattcaattctataaagagcaataaaacatcctgtgtc
cctacagccccatgtttacgacggtggcacatgggggatttctaccattcctttctggtg
gtattccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaagaaaca
aatcaagcactgtgcattgtcgtctttctgttgatcatggtgataggaaaacttgtggta
ctcaacctcttcattgccttgctgctcaattccttcagcaatgaggagagagatggaaac
ttaggtggagagtccaaaaaaaccaaagtccagttagccctggatcggttccgccgggct
ttttgctttgtaatacatactcttcagcatttttgtcacaagtggtgcaggagtcaaaac
ttaccaaggcaaaaagaggtgacaggaggccctgctgccaaaagcaaagacatcattcca
ctggtcacagagatgaaaaagggcccagagacgagggagcagcatgaccggacttggttg
gccccacttgcagaggaagaggatggttttgaatctcctggtgaaaataatgcacagcat
gtcacacaacctgaggctggaaaacaggcctttgaactccatcaggtgaccaagaagtcc
ataagcccaggagctcaaagtgtggaaattgatgtgttctctgaagatgacatatgtttg
tcagaaaaggatccccaaaagaagtgtgatactaccagtgtgctctcagaatgtagcacc
gtcgatccacaggatccctttgggtgggtgcctgaaatgattcccaaaaaagaaccagag
agatgttttcccaaaggcctgggtcactgcttcccatgctgtgccatggacaagagaaag
tccccctggatcatttggtggaacctgcgaaaaacttgctaccaaatagtgaaacacagc
ttgtttgagagctttattatctttgtgattctgctgagcagtggggcactggtatttgaa
gatgttcatcttgagaaacgacccaatatccaagcattacttaattgtactgaccatatt
ttcacatacatttttatcctggagatgggtctaaaatgggtggcctttggatttgggaag
tatttcaccagtgtctggtgctggcttgatttcatcattgtgattgtctctgtgaccagt
ctcattgacttaaagagcttgaagtccttccggaccctaagagccctgaggcccctgcga
gcattgtctcagttcgaaggaatgaaggtggtagtcaatgctctcataggtgccatacct
gccattctgaatgttttgcttgtctgcctcattttctggttgatattttgtatcctggga
gtaaacttcttctctggaaattttggaagatgcattaataaaacagatataaactcagtt
ataaattacagcactgttgcaagcaaaactgaatgtgaaggtggaaatttaacttgggtc
acccttccagtcaactttgacaatgtgggaatggcttaccttgccctgctgcaagtggca
acatttaagggctggatggatattatgtatgcagctgtcgattccagagggaaagatcta
cagccagggtttgaggagaaaccagaaaactaccttttcttcgtggcttttatcatcttt
ggttcattctttacgctgaatctttttattggtgttattattgacaacttcaaccaacag
cagaaaaagataagtgatgaagacatttttatgacagaagaacagaagaaatactataat
gcaatgaaaaaattaggatccaaaaaacctcaaaagcccattccaagacctctgaataaa
tgccaaggtctcgtgtttgacctagtcacaagccaggtctttgacatcatcatcatcatc
ctcattttcctcaacatggttagcatgatggctgaatcagatgaccagtctgaagccacg
aaactcatccttgagcgtctcaacctggcctttgtggtcatctttacaattgagtgtctc
accaaaatctttgctttgaggcaatactacttcaccattggctggaatttatttgattgt
gtgattgtggttctttctatcgttagtacaatggtttctgccttggagaaccagcagcac
attcccttccctccaacactcttcagggttgtccgcttggctcggattggtcggatcctg
agacttgttcgggcagcacgaggaattaggactctccttttcgctctgatgatgtctctt
ccctctctattcaacatcggtcttctactttttctggttatgtttatttatgccattttt
ggtatgagctgtttttgcaaagtgaaagaggagcatggaattgatgacatattcaacttc
aaaacttttgtcggcagcatactctgtctcttccagatcaccacctcagcaggctgggat
gccctcctcaagcccatgctgcaatcaaaggattcatgcaaccccaacttagacagccgt
cacctccctgccatagccatcacctacttcgtcagttacatcatcatctcctttctcatt
gttgtcaacatgtacattgctgtgattttagagaattttaacacagccactgaagaaagt
gaggaccctttgggtgaagatgactttgagatattctatgaagtctgggaaaagtttgac
ccagaagcaacacagttcatcaaatattctgccctttctgactttgctgatgcccttcct
gagcctttgcgcgtggcaaagcccaataaatttcaatttctcatgatggacttgcccatg
gtgagtggagatcgtctccactgcctggatattctcttcgcattcaccactagggtactc
ggtgactccggtggcctggacagcatgaaaatgatgatggaggagaagttcatggaagcc
aacccttccaagaagttatatgaacccatagtcaccaccaccaagaggaaggaagaggaa
agatgtgctgctgttattcaaaaggcctttcgaaaatacaggctgaagatgtccacatgt
gccttggaagacaggccccgttcaccactccacacactctgcaatggagacctgtccagc
tctggggtggccgagggcaaagtccactacgactga
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integrated database retrieval system
