Nicotiana sylvestris (wood tobacco): 104230108
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Entry
104230108 CDS
T05026
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
nsy
Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020
RNA polymerase
nsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104230108
09124 Replication and repair
03420 Nucleotide excision repair
104230108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsy03021
]
104230108
03019 Messenger RNA biogenesis [BR:
nsy03019
]
104230108
03400 DNA repair and recombination proteins [BR:
nsy03400
]
104230108
Transcription machinery [BR:
nsy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
104230108
Messenger RNA biogenesis [BR:
nsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104230108
DNA repair and recombination proteins [BR:
nsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104230108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
104230108
NCBI-ProteinID:
XP_009781150
UniProt:
A0A1U7X3U6
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFC
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatagtattagaaagaaacatgcaacttcatccccgtcatttcggccgt
gatcttcgcgaaaaactcgtctccaagctcatgaaagatgtcgaaggcacttgcagtggt
cggcacggtttcatagtggcgattactgggatcgaaagcgtggggaaaggtttaattcgt
gacgggacgggttttgttactttcccagtgaagtatcagtgcgttgtgtttcgacctttc
aaaggtgagattttggaagctgttgttaccatggttaacaagatgggatttttttgctga
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