KEGG   Nicotiana sylvestris (wood tobacco): 104232520
Entry
104232520         CDS       T05026                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020  RNA polymerase
nsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104232520
  09124 Replication and repair
   03420 Nucleotide excision repair
    104232520
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104232520
   03019 Messenger RNA biogenesis [BR:nsy03019]
    104232520
   03400 DNA repair and recombination proteins [BR:nsy03400]
    104232520
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     104232520
Messenger RNA biogenesis [BR:nsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104232520
DNA repair and recombination proteins [BR:nsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      104232520
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 104232520
NCBI-ProteinID: XP_009784043
UniProt: A0A1U7WZN0
LinkDB
Position
Unknown
AA seq 177 aa
MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGANA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttttttcacatagtattggagagaaacatgcagctgcatcctcgtcactttggccgt
gaccttcgggaaaagctcgtctcaaaactcatgaaagatgtcgaaggaacttgcagcggt
cggcacggtttcattgtggccattactgggattgaaagcgtcggtaaaggtctaattcgt
gatggaactggttttgttactttcccggtgaagtatcaatgtgttgtatttcgacctttc
aaaggtgagattttggaagccgttgtaaccatggttaacaagatgggattttttgctgaa
gcagggcctgtgcagattttcgtttcaaaccatttgataccagatgacatggagtttcag
tcaggagatgtaccaaattatacaacttccgatggctccgtcaaaattcagaaggagagt
gaagttagattgaagatcattggaactcgtgttgatgccacagaaattttctgcatcggt
acaataaaggatgatttccttggtgtgatcagtgatcctggcgcaaatgcttga

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