KEGG   Nicotiana sylvestris (wood tobacco): 104235443
Entry
104235443         CDS       T05026                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2 isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
nsy  Nicotiana sylvestris (wood tobacco)
Pathway
nsy03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    104235443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nsy03021]
    104235443
Enzymes [BR:nsy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     104235443
Transcription machinery [BR:nsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     104235443
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5 DUF2002 DUF688
Other DBs
NCBI-GeneID: 104235443
NCBI-ProteinID: XP_009787511
UniProt: A0A1U7XCY1
LinkDB
Position
Unknown
AA seq 1226 aa
MDECLGRFIHMTTSDIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDN
LDVAPIKELGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVE
PGYDPSKRGDGDWKHASVKFGKVSLERPRFWAGEKFSVDGGKEYLDLWPRHARLQNMTYS
ARIMVETHVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCWMNG
VDKPDCEFDHGGYFIVKGAEKTFIAQEQICLKRLWVSNSPTWTVAYRPVAKRNRVYIKLA
ETLKLEHIKGAEKALTVYFSVAEMPIWILFFALGVSSDREVVNLIDVDIEDTNIVNILVA
SIHDADKKCEDFRKGKKALAYVDRLIKGCRFPPQESVEECIQQYLFPNLSGLKQKARFLG
YMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLKAMQRDLYGD
RQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPLQMTADMRKT
RQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTILKPLLETLY
RCGMQKLVDDSATSLHGKQKVLLNGDWVGICEDSAFFVSKLRRKRRRNEVPHQVEVKRDE
QQGEVRMFSDAGRILRPLLVVSNLKKIKALKGGDCGFQSLLDNGIIELIGPEEEEDCRTA
WGVEYLLTADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIG
FSTVNPNIRVDTNTHQLYYPQRPLFRTMLSDSLGKPKYTHSQKGMLPRPEYYNGQCAIVA
VNVHLGYNQEDSLVMNCASLERGMFRSEHVRSYKAEVDNKEAIGKKLKIEDSVNFGKTQS
KIGRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKLKHTERGMVQKVLLSANDEG
KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTAQGIVPDIVINPHAFPSR
QTPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIIEQLHGRGFSKWGNERVYNGRTGEM
GQNLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA
HGAAANLHERLFTLSDSSQMHVCGKCKNMANVIQRSVQGGKVRGPYCRFCESVEDIVKVN
VPYGAKLLCQELFSMGISLKFDTEIC
NT seq 3681 nt   +upstreamnt  +downstreamnt
atggatgaatgcttagggcgcttcattcatatgacgacttctgatatcatggatgaagtg
ggatgtagtagtggtaaagggaagatatcaaatggatcagcgatgatggattttgatatt
gatgatctctttgaagtggatgatgatgattgggatgaggacgaggacgatgatgataat
cttgatgtggctccaatcaaagagttgggtgaaggtttcttgaagaacttttgtaaaaag
gcatcaactggtttttttgagaagtatggcttgattagtcatcagattaattcctataat
gacttcatcaactttggaatccaaagagtgtttgacttggttggagagatccatgttgag
ccagggtatgatccatcaaagagaggtgatggtgattggaagcatgcttctgttaagttt
gggaaagtatcccttgagcggccaaggttttgggcaggggaaaagttttctgtggacggt
gggaaagagtacctggacttgtggccacggcatgctcgccttcagaacatgacctactct
gccaggattatggttgagactcatgttcaggtgtatactaaaaagctagttagaagcgac
aagttcaaaactggggtagaccagtttgttgacaaggagtgtgagatggaagacaaaagg
gatgtcttgattgggagaatccctgtgatggtgaactcagagttgtgctggatgaatggt
gttgacaagcctgattgtgaatttgatcatggggggtatttcatagtcaaaggggctgaa
aagaccttcatcgcacaggagcagatctgtttaaaaagactctgggtgtcaaacagtccc
acttggacggttgcatatcgcccagttgcaaaaaggaatagagtctatattaaactggct
gagaccttgaagcttgagcacataaagggagcagaaaaggcccttactgtgtacttctca
gtggcggaaatgccaatttggattttgttttttgctctaggtgtatcctctgacagggag
gtagtaaatttaattgatgtggatattgaagatactaatattgtcaatatactagtagct
tcaatccacgatgctgataagaagtgtgaggatttcaggaaggggaaaaaggctctcgct
tatgttgatagacttataaagggttgtagatttccacctcaagagtctgttgaggagtgc
atacaacaatacctgttccctaatcttagtggtctcaagcagaaggctcgcttccttggc
tatatggtaaagtccctcttgcacgcttttattggtcgcagaaaagttgacaacagagat
gattttcggaacaagagattggagctggctggtgagctccttgaacgagagctcagggcg
cacattaaacatgctgagaggcgtatgctgaaggcaatgcaaagagatctttacggagat
cgacaagttcaaccaattgagcactatcttgatgcatctattattacaaatggtctctcc
agggccttttccactggacactggtgtcacccttacaagagaatggagagggtctctggt
gtagtagcaactatcagacgaaccaatcctttgcaaatgactgctgatatgaggaaaaca
cgtcagcaggttacatacactgggaaggttggcgatgctagatacccacatccttcacac
tggggaaaggtatgttttctctccaccccagatggagaaaattgtggcctggtgaaaaac
ttggcgagtatgggtcttgtcagcacaactattttgaagccacttcttgagacgttgtac
cggtgtgggatgcaaaagttagtagatgatagtgccacctcactccatggaaagcaaaag
gtacttttaaatggggattgggttggaatatgtgaagattctgcattctttgtttcaaag
ctaagacgtaagcgccgcaggaatgaagtgccacaccaggttgaagttaagagagatgag
cagcagggtgaagttcgcatgttttctgatgcgggaaggattctgcgccctcttcttgtt
gtttcaaatctaaagaaaatcaaagctttgaaagggggagactgtggctttcaatctctt
ctggacaatgggattattgagcttataggacctgaagaagaagaagactgtcgaactgca
tggggagttgaatacctcttaacagcagataaggagaacccacctgccaagtatacccat
tgtgagttagacatgtcattcctgttgggcttgagctgtggtattatcccttttgcaaat
catgatcatgctaggagagtcctctatcagtctgaaaagcactctcagcaggcaattggg
ttttcaacagtgaatccaaacattagagttgatacaaatacccatcaattgtattatcct
cagaggccacttttccggacaatgttgtcagattcccttgggaagcccaaatatactcat
agccagaaaggaatgcttccacggcctgaatactacaatggtcaatgtgctattgttgca
gtgaatgttcaccttggctataaccaagaagattcattggttatgaattgtgcatcactg
gagcgtggaatgtttcggtcggagcatgttaggagctacaaggctgaggttgacaataag
gaagctatcggaaagaagctaaagattgaggattctgttaactttgggaaaacccagagt
aaaattggacgagtggacagcctagatgatgatggttttccattcattggggcaaatctc
cagagcggggatatcataattgggaaatacgcagaatcaggggctgatcacagtgtcaag
ctgaagcatactgaaaggggtatggttcaaaaggttctgctctctgccaatgatgaaggg
aagaactttgctgttgtatctctgagacaagttcgttctccatgtcttggagacaagttc
tccagcatgcatggacaaaagggtgtccttggatttctggaatctcaggagaatttccct
tttacagctcaagggattgttccagacattgtaatcaatcctcatgcatttccttcaagg
caaacccctggtcagctgctggaagccgctttagggaagggcattgccctaggtggcggt
caaaaatatgccactcccttttccactttatcagttgatgccataatagagcagcttcat
gggcgaggtttctcaaaatggggaaatgagagagtttacaatggccgtacgggtgaaatg
ggtcaaaacctgatcttcatgggcccaacattctaccaacgcctcattcatatggctgaa
gacaaagtgaagttccgtaataccggaccagtccatccccttactcgccaacctgtggca
gacagaaaacgctttggtggaattaaatttggtgaaatggagcgtgactgtcttatagct
catggtgctgcagcgaacttgcatgaacgccttttcacactcagtgactcctcccaaatg
cacgtctgtgggaagtgcaagaacatggcaaatgtaatccagaggtctgttcaaggtggt
aaggtaagaggtccttattgccgcttctgtgaatcagttgaagatatagtgaaggttaat
gtgccatatggtgcgaagttattgtgccaggagctcttcagcatgggcatatctctcaag
tttgatactgagatttgctag

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