Nicotiana sylvestris (wood tobacco): 104248427 Help Entry 104248427         CDS       T05026                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism nsy  Nicotiana sylvestris (wood tobacco) Pathway nsy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nsy00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     104248427  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nsy03400]     104248427 DNA repair and recombination proteins [BR:nsy03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      104248427 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor KDM3B_Tudor LBR_tudor Motif Other DBs NCBI-GeneID:  104248427 NCBI-ProteinID:  XP_009802974 UniProt:  A0A1U7YUU7 LinkDB All DBs Position Unknown AA seq 1314 aa AA seqDB search MGSSRRSSNGRSPIVNQQSQITSFFSKMTSPSPSPSPSPLVPKKIPVKSNPNPNPNAEPK LKYSPSTSPCASPTTPSPLQVKRKITAPISAIIDLKPSYGQEIVGKRVKVYWPLDRTWYE GCVKSFDGVSGEHLVKYDDGDEEMIDLAEEKIELVVEAPARKLRRLRKSLVVEEAEEEEE EEKLEDLESVEDDSEDEDWGKIADKQVYEDEDVDEDMDLVVEEEKDDAVGSRSRKAGADK VVVSRKRKSGEGVKLSSSSSKKSKTLADKKSANSKVDNAVNGVNGKELVKTNEDCVRPTN NDNVLLCGAADRFGQREAEKFPFVAKDRKDANRRSPGDANYDPKTLYLPPNFLKGLTGGQ RQWWEFKSKHMDKVLFFKMGKFYELYEMDAHIGTKELHLQYMKGEQPHCGFPEKNFSMNV EKLARKGYRVLVVEQTETPEQLETRRREKGSKDKVVRREICAVVTKGTLTEGEMLAANPD ASYMMAVTESSQTAVLQGKRTYGVCMVDITTSKVIIGQFEDDSDCSALCCLLSELRPVEI IKPAKLLSLETERVLLRYTRNPLVNELVPVSEFWDAERTICEVKAIYRNMSSPPLTSSPN EMESHESTTSEEYGERNLLPDVLCELVNLGRNGSYALSALGGALYYLKQAFLDESLLKFA KFEPLPLSGFCDSTQKPNMALDAAALENLEIFENSRDGDSSGTLYAQINHCITAFGKRML RSWLARPLYHPESIRERQDAVAGLKGLNLPFVLEFRKELSRLPDMERLLARLFGSSEANG RNANKVILYEDAAKKQLQEFVSALRGCESMVHACSSLGVILENMDSKLLYYLLTPGKGLP DVDSILKHFKDAFDWVEANNSGRIIPHEGVDEEYDAACKQLQEIELKLSKHLKEQRKLLG DSSIDYVTVGKDAYLLEVPECLCRSIPKEYELQSSKKGYFRYWNPVLKKLIGELSQADSE KESKLKSILQRLIGRFCEHHNKWRELVSITAELDVLISLSIASDYYEGPTCRPNIKSVPS EDDVPVLHAENLGHPVLKSDSLDKGAFVSNNVSLGGPPNASFILLTGPNMGGKSTLLRQV CMAVILAQIGADVPASSFDLSPVDRIFVRMGAKDHIMAGQSTFLTELLETASMLSLASRN SLVALDELGRGTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLSIDYQKDSRVSLCHM ACQVGKGSGGLEEVTFLYRLTPGACPKSYGVNVARLAGLPDGVLQRAAAKSEEFEINGYN KQSEENSYGNLTRKTAALVQNLMNFIIEEKCDNGVVLCELNGLQRRARILLEQN NT seq 3945 nt NT seq  +upstreamnt  +downstreamnt atgggttcttctcgccgctccagcaatggcagatctccgatcgtcaatcaacagagtcaa atcacttctttcttctctaaaatgacttcgccctcaccttctccttccccatcacctctt gtccctaaaaaaattccagtcaaatctaaccctaaccctaaccctaatgctgagcctaaa cttaaatatagtcctagtaccagtccttgtgctagtcctacgacaccttcgcctctacag gtgaagcggaagataactgcacctatttctgccattattgaccttaagccgtcgtacggg caagagatagtgggcaaaagagttaaggtctactggccattggatagaacttggtacgaa ggctgtgtaaagtctttcgacggtgtttctggtgaacatttggttaagtacgacgatggt gatgaggaaatgattgatttagctgaagaaaagatcgaattggtagtcgaggcacctgcg agaaagttgaggcggttgcggaaatctttggtggtggaagaagctgaggaggaggaggag gaagagaaattggaggatttggagagcgttgaagatgattctgaggatgaagattgggga aaaattgcggataaacaagtgtatgaagacgaggatgttgatgaggatatggacttggtg gttgaggaagagaaagatgatgctgttggatcgagaagcaggaaagcgggtgcggataag gtggtggtgtcgaggaagcggaagagtggtgaaggggtgaagttaagttcgagttcgagc aagaagagtaagactcttgcagataagaagagtgctaatagcaaggtggacaatgcagtg aatggagtaaatgggaaagagcttgttaaaaccaatgaggattgtgtcaggccaaccaac aatgataacgtactgctgtgcggtgcagcagatagattcggacaacgtgaagcagagaaa ttcccttttgttgcgaaagataggaaggacgctaataggagatcccctggagatgccaat tatgatccaaagactctttacctacctcctaattttttgaaaggtttaactggtggtcag agacaatggtgggagttcaagtcgaagcacatggataaagttctgttttttaagatggga aagttctatgagctttatgagatggatgcacatattggaaccaaggaacttcatttgcag tacatgaagggagaacaaccccattgtggatttccagaaaagaacttctcaatgaatgta gagaagttggcgcgaaagggttatagggttcttgtggttgagcaaacagagacacctgaa cagcttgagactcgtcgaagagagaagggatctaaagataaggtcgtcagacgtgaaata tgtgcagtggtcactaaaggaacattaactgagggagaaatgctcgcagcaaaccctgat gcttcatatatgatggcagtgactgaaagctctcaaactgctgtattgcaagggaagcgt acttatggtgtctgtatggtggatatcaccacaagcaaggttattattggacagtttgag gatgattcagattgtagtgccttgtgttgtctgctttctgagttaagaccagtggaaata ataaagccagctaaattgcttagtcttgagactgagagagtactgctgcggtacacacgt aatccgctggtaaatgagttggttcctgtctctgaattttgggatgctgagagaaccatt tgtgaggtgaaggcaatctataggaatatgagcagtccaccgctgacatcatctccaaat gaaatggaatcacatgaaagcactacctcagaggaatatggtgaaaggaaccttctacca gatgttttatgtgagcttgtaaatcttggtaggaatgggagttatgcactctcagcacta ggaggagctctatactacttgaagcaagcttttctggacgaatccctgctcaaatttgcg aaatttgaaccacttcccctttctggtttttgtgatagtactcaaaaaccgaatatggct cttgatgcagctgcgcttgagaatcttgagatatttgagaacagtcgagatggagattct tcagggacattatacgctcaaatcaaccattgtatcacagcatttgggaaaaggatgctc aggtcatggcttgcaagacccttatatcatccagagtccataagagaacgtcaggatgct gtagccggattaaaggggctcaatctaccttttgttcttgagtttagaaaagagttgtca aggcttcctgatatggaacggttgcttgcacgcctctttggtagcagtgaagcaaatgga agaaatgcaaataaagtgattttatacgaggatgcagcaaagaaacaactgcaagagttc gtatctgctttacgtggatgtgaatcaatggtgcatgcatgctcttcacttggggtgatc ttggaaaacatggattcaaagctactatattatctattaacaccaggtaaaggtcttcca gatgtagattcaattctcaagcatttcaaggatgcttttgattgggtagaagcaaataac tcgggccgtattatacctcatgagggggttgatgaggagtatgatgctgcatgtaaacaa ttgcaggagattgaacttaaattatccaagcacttgaaggaacagaggaaactgcttgga gactcatcaatagactacgtgactgtaggaaaagatgcataccttttggaagtaccagaa tgtttgtgcaggagcattccgaaggagtacgaattacagtcatcgaaaaagggttatttc aggtactggaatccagtcttaaagaaattaatcggagagctctcacaagctgattcagag aaggaatctaagctaaaaagtattttgcagaggttgataggacggttttgtgaacatcat aataagtggagagaattagttagtatcactgcagaattggatgttttaatcagtttatct attgcgagcgattactatgagggaccaacatgtcgtccaaacatcaagtcagtgccaagt gaagatgatgtgccagttcttcatgctgaaaatttaggacatcctgttcttaaaagtgat tctctagataagggagcttttgtttccaacaatgtttcccttggcggtcctccgaacgcc agctttatccttcttactggtcctaacatgggagggaaatccactcttttgcgccaagtt tgcatggctgtaattttggcccagataggagctgatgtaccagcatcatcctttgactta tcacccgtcgatcgtatatttgtaagaatgggggccaaagatcatattatggcaggccag agtacattcttgacagaactcttggaaactgcttcaatgctgtctttggcgagccgtaat tcacttgtcgcactcgatgaacttggtcgcggtacatcaacttccgatggacaagcaata gctgaatcagttcttgaacactttgtccacaaggtgcaatgtcgaggaatgttttctacc cactatcatcgattatctattgactatcagaaagattccagagtgtcactgtgccatatg gcatgccaagttgggaaagggtccggaggtcttgaggaagttacttttctatacaggttg acaccaggtgcatgtcctaaaagttatggtgtcaatgtggcacggctggctggacttcct gatggtgtgcttcagagagctgctgctaaatctgaagagtttgaaattaatggttacaat aagcaatctgaagagaactcctatgggaatttgacaagaaagacagcagcacttgtgcag aatttgatgaattttattattgaagagaaatgtgacaatggtgtggttctttgtgagttg aatggattgcaaaggagagcaagaatactccttgaacaaaattga

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