Nicotiana tabacum (common tobacco): 107759374
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Entry
107759374 CDS
T04643
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00100
Steroid biosynthesis
nta00909
Sesquiterpenoid and triterpenoid biosynthesis
nta01100
Metabolic pathways
nta01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107759374
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107759374
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nta01006
]
107759374
Enzymes [BR:
nta01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107759374
Prenyltransferases [BR:
nta01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107759374
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
107759374
NCBI-ProteinID:
XP_016432790
UniProt:
A0A1S3WYJ8
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All DBs
Position
Un
AA seq
411 aa
AA seq
DB search
MGSLGAMLRNPEDIYPLMKLKLAARYAEKQIPPQPHWAFCYIMLRKVSRSFSLVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSVATEVKAPILMSFHRHVYDREWHFSCGTKDYKVLMD
QFHHVSTAFLELGKHYKEAIEDITMRMGAGMAKFICKEVETIDDYAEYCHYVAGLVGLGL
SKLFRASGKEDLVSDSLSNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPRQIWSKYVNKL
EELKCEENSVKAVQCLNEMVTNALSHVEDSLTYMSTLRDPAIFRFCAIPQVMAIGTLAKC
YNNIEVFRGVVKMRRGLTAKVIDRTRNMADVYGAFYDFSCILKSKVEYKDPNAAKTLRRL
ETILRTCKDSGTLNKRKSFVIQSRPNYNSALVVVLVVIIAILSAYQSGNRP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttaggagcaatgctgaggaatcctgaggatatttatccattgatgaaactg
aagttagcggcgcgatatgcagagaaacagatccctcctcagccacattgggccttctgt
tacataatgcttcgcaaggtctctcgtagcttttctctcgtcattcaacagcttcccgtg
gaacttcgcgatgctgtatgcattttctatttggttcttcgagctcttgacactgtcgag
gacgatacgagtgtagccacagaggtgaaagcacctatattgatgtcattccatcgccat
gtttatgatcgtgaatggcatttttcatgtggtacaaaggactacaaggttcttatggat
cagttccatcatgtttcaactgcttttctggagctagggaaacattacaaggaggcaatt
gaggacattaccatgaggatgggtgctggaatggcaaagtttatatgcaaggaggtggaa
acaattgatgattatgctgaatattgtcactatgtagccgggctcgttggattaggctta
tcaaaacttttccgcgcctctgggaaagaagatttggtttcagattctctctccaattcc
atgggtttatttcttcagaaaacaaatatcattagagattatctggaggacataaatgaa
gtacctaagtgtcgcatgttttggcctcgtcagatttggagtaaatacgttaacaagctc
gaggagttgaagtgtgaggaaaactctgtaaaggctgtgcaatgtctgaatgagatggtc
actaacgctttatcacatgtagaagattctttgacttacatgtccacactgcgagatcct
gctatctttcgattctgtgctattccacaggtcatggcaattgggacattagcaaagtgc
tacaacaacatagaagttttcagaggagttgtaaaaatgagacgcggtctcactgctaag
gttattgaccggaccaggaacatggcagatgtatatggtgctttctacgacttctcttgt
attctcaaatccaaggtggagtataaagatccaaatgcagcaaaaactttaagaaggctt
gaaacaattttgagaacttgcaaagactctggaaccttgaacaaaaggaaatctttcgta
atccagagcagacctaattacaattcagctttggttgttgtccttgttgtcataatagct
atccttagtgcataccaatctggaaaccggccttag
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