Nicotiana tabacum (common tobacco): 107764109
Help
Entry
107764109 CDS
T04643
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase-like
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
nta
Nicotiana tabacum (common tobacco)
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nta03016
]
107764109
Enzymes [BR:
nta01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
107764109
Transfer RNA biogenesis [BR:
nta03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
107764109
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
107764109
NCBI-ProteinID:
XP_016438122
UniProt:
A0A1S3XE33
LinkDB
All DBs
Position
Un
AA seq
625 aa
AA seq
DB search
MEDIEDLLAGAGAGVPPGFRLPVPAAVGVNPKQRKKNGVKNKLTVVQDSPAPKLPGTQTI
YIKTFGCSHNQSDSEYMAGQLSAFGYALSDNPDEADLWMINTCTVKSPSQSAMDTLISKG
RSAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLTRKTLPA
LDLPKVRKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTVDSLVGRVKNVIADGVREI
WLSSEDTGAYGRDIGVNLPILLNAIVAELPLDGSTMLRIGMTNPPYILEHLKEIADVLRH
PCVYTFLHVPVQSGSDSVLSAMNREYTVGEFRKVVDTLMELVPGMQIATDIICGFPGETD
EDFAQTVDLIKDYKLAQVHISQFYPRPGTPAARMKKVPSNVVKQRSRELTAVFESFTPYT
GMEGKVERIWITDIASDGIHLVGHTKGYIQVLVIGPESMLGASAMVKITSVGRWSVFGEV
IEIISQNNKEVGSHERVDEKCSPCANSEEACACSKEQEPGSSYATTSCCSQSPMQETTLL
KNEPKLDDQGSRNLIGWFLRNRKNHSSKKMDLAGLASKEKKQIQDLGRQSAWGSVDIALL
SGVLLSLFTIVALFLNLGSRSLSSK
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaagacattgaagatttgcttgcgggtgccggcgccggagtgcctccaggtttccgg
ttaccagttccggcggccgttggagtcaatccaaagcaaaggaaaaagaacggtgtaaag
aataagctaacagtagtgcaagactctcctgcacccaaattacctggcactcagactatt
tacatcaagacatttggatgttctcataaccagagtgattccgagtatatggccggtcag
ctttcagcttttggttatgctctgagtgataaccctgatgaggcagacctgtggatgata
aatacctgcacagtcaaatctcctagtcaatctgccatggatactcttataagtaaaggc
agaagtgcgaaaaagccattggttgtagcaggttgcgtccctcaaggaagccgtaatctg
aaggagctagaaggagttagtatagtaggagttcagcagattgaccgtgtggttgaagtt
gtggaagagactttgaaaggtcatgaagttcggcttctaacccggaagacattaccagct
cttgatcttccaaaggtccgaaagaacaagtttgttgagattcttccaataaatgttggt
tgtttaggtgcttgtacgtattgcaagacgaagcatgcccgtggtcatttaggaagttac
acagttgacagccttgtgggccgagtcaaaaatgtcattgctgatggagtgagagaaatc
tggctgagtagtgaagacactggagcttatggtcgtgacattggagttaatcttcctatc
ctattgaatgctatagttgcagagcttcctttggatggaagtacaatgctccgaattggg
atgaccaaccctccttatattcttgagcacctgaaggagatagctgatgtcttacgacat
ccatgtgtgtatacttttcttcatgtgccagttcagtcgggtagtgattcagtcttgagt
gcaatgaatcgtgaatacactgtgggtgagttcaggaaggtggtggatacattaatggaa
ttggtccctgggatgcagattgcgacggatattatttgtggatttcctggtgaaactgat
gaagattttgctcagaccgttgaccttattaaggactacaagttagctcaagttcatata
tcacagttctaccctaggcctggcactcctgctgcaagaatgaagaaggttcctagtaat
gtggtgaagcaacgaagccgtgaattaactgctgtattcgagtcctttactccatatact
ggaatggaaggcaaagtagagaggatatggattactgacatagcttcagatggaattcat
ttggtgggtcacactaagggatacattcaggtgctggtgattggtccagaaagcatgctg
ggtgcctcagctatggtgaagattacatccgtaggtagatggtcagtcttcggagaagtg
atcgagatcatcagccaaaacaataaggaagttggttcacatgagagagttgatgaaaag
tgctccccgtgcgccaattcagaagaagcttgtgcctgttcaaaagagcaagaacctggt
tcttcttatgcaacaactagttgctgcagtcaaagtccaatgcaggaaacaacactgctg
aagaatgaaccgaagctagatgatcaaggtagcagaaacttaattggatggtttctaagg
aatcgtaagaatcattcttccaaaaagatggacttggccgggttagcgtccaaagagaag
aagcaaatacaggatttaggtcgccagagcgcgtggggttctgttgatatagctcttctt
agtggagtattattgagcttgttcacaatagtagctctatttttgaatcttggatctagg
agtttgtcatctaagtaa
DBGET
integrated database retrieval system
