KEGG   Nicotiana tabacum (common tobacco): 107766126
Entry
107766126         CDS       T04643                                 
Name
(RefSeq) DNA-directed RNA polymerase IV subunit 1-like
  KO
K16250  DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]
Organism
nta  Nicotiana tabacum (common tobacco)
Pathway
nta03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nta00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107766126
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nta03021]
    107766126
Enzymes [BR:nta01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     107766126
Transcription machinery [BR:nta03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     107766126
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 RNA_pol_Rpb1_4 RNA_pol_Rpb1_1
Other DBs
NCBI-GeneID: 107766126
NCBI-ProteinID: XP_016440347
UniProt: A0A1S3XK43
LinkDB
Position
Un
AA seq 1447 aa
MEHDLIEQQVPSGTLKGIIFNILSETDAAKLAAKVIGSVNEVTDPALGFPNPIFECSTCG
AKDGKKCEGHFGLINFPFTILNPYFISEVAKILNKVCPGCKSVRRDKVKGADTTSACNYC
DGILRGYPPMKFKVSPKDMFGKTAIMAEVSEKKLQQTCGGSLASDYWNFIPDDAQQDASL
NSSKYKRVLTHAQVYSILKDVDPGFLEGLLRRKNSIFLKSCLLTPNSHRVTEFGQHMIFD
ESNRLYRKLIDFRGTANDLSMCVFNRIKVSKIRAERSLTNDPNAPATGLKYVKELVLAKR
TNHAFRMVVVGDPNIKLGEIGIPCHVAEDLHMAEPLSSRNWEKLTDHCDLMILQKGAIHV
RRNGVLVRISVMDQLQRGDIIYRPLIDGDVVLINRPPSIHQHSLIALSVRILPIISVLSI
NPLVCSPFRGDFDGDCLHGYVPQSIDSRVELSELVGLNRQLIDGQSGQNLLSLSHDSLTA
AHLVLEEGVFLDRFQVQQLQMFCPHQVGMPAIVQAPLRNRSYWTGKQLFSLFLPSDLDCD
FPSNGVCISDGEIVTSSGGSSWLRDASENLFYSLVKHHGGDTLDLLYAAQAVLCEWLSMR
GLSVSLSDLYISSDPYSRENMIDEVFCGLQEAERLSYIQLLMSRYNHDFLAGSLEVSQKA
MGFNLEFMSIMQQKSASLSQASVSSFKHVFRDIQNLVYNYASKENSFLAMLKAGSKGNLL
KLVQHSMCLGLQQSLVPLSFRMPRRLSCDAWNNHKAHLPFEKAHNVPERPGPYIPCAVVE
NSFLAGLNPLECFVHSLTTRDSSFSGHADVSGTLNRKLMFFMRDLYSGYDGTVRNAYGNQ
IVQFSYYSAEQISSTYNRASHAIGGHPVGSLAACAISEAAYSALDLPVGALEPSPLLNLK
KILEAGVKSNSSEKTATLFLSRRLGRWAHGFEYGAIEVKGHLERLLLSDIVSTVMICFSP
ETCKSTHSSPWVCHFHIDKEYVKTRRLKLKSVIDALNMRYRSTRMEAGIDLPSLHITCKD
CSAAEMQKANSKICIAVAVVETSKDSFSLLDTLRDLVIPFLLETVIKGFSAFKKVDILWR
ELPSTSKSSRGSTGELYLQVFMSESCDRNNFWNALVDSCLHIMDLIDWERSHPDNVHDLT
VAYGVDVAWKYFLRNLNSAVSETGKKILPEHLVLAADCLTATGEFVPLNTKGLAQQRKCA
GVISPFMQACFSHPGDSFVRAAKTELSDDLQGSLEALAWGKTPSTGTGFSFDIIYSEKGY
EPAAPTDVYALLGNHVTSNRQKVKVTLDEDNETADKALARRLCKLDDLNTKRCKSQWSIA
NLRSFLSFNDIKKLSQALKQMLSKYAIDRELSEADKSIVMMALHFHPRRSEKIGKGAMEI
KIGYHKEYEDSRCFMLVRTDGTVEDFSYRKCLQHALELIAPQKAKTYKWLNGASRGPTAS
SLQNEVK
NT seq 4344 nt   +upstreamnt  +downstreamnt
atggagcatgatcttattgagcagcaagtgccttcaggtactctgaagggcataattttc
aatatcttatcggagactgatgcagccaaattggcagctaaggttattggatcagtgaac
gaagtaacagatcctgcattggggtttccgaatccaatctttgagtgctccacctgtggt
gcaaaagatgggaaaaaatgtgaaggtcattttggattaataaacttcccgttcacaata
ctcaatccctatttcatatctgaggttgcaaagatcctgaacaaagtatgtccgggatgc
aaatctgtgcgtcgtgataaggtcaagggtgctgatacgacatctgcctgcaattactgt
gatggaattttaagaggttatccaccaatgaaatttaaagtatctcctaaagacatgttt
ggaaagactgccattatggcagaagtgagcgaaaagaagcttcagcaaacttgtggagga
agtttggcttctgactattggaattttatcccagatgatgcacaacaagatgcaagttta
aattcttcaaagtacaaaagagttttaacacatgctcaggtatatagcattctgaaagat
gttgatccagggtttcttgaaggacttctcagaaggaagaactcaatcttccttaaaagc
tgcctcttgactcccaatagtcatcgtgtcacagaatttgggcagcacatgatatttgat
gagagtaataggctttacagaaagctgattgacttcagagggacagcaaatgacttgagc
atgtgtgtttttaatagaattaaagtttccaagatacgtgcggagaggtcactaaccaac
gatcctaatgcccctgctactggtttgaagtatgtgaaagaactggttctggcaaaacgc
actaaccatgctttccgcatggttgtggttggtgatcccaacataaagctaggtgagatt
ggtattccgtgtcatgttgcggaggatctccatatggcggaacccctaagttcacggaat
tgggaaaagttgactgatcactgtgatcttatgattcttcagaagggggcgattcacgtt
cgtagaaatggtgtcttagttcgtattagtgtaatggatcagttgcagagaggggatata
atatatagacctcttattgatggagatgttgtgttgataaatcgacctccatctattcat
caacactcactaattgctctgtctgttaggattcttccaataatttctgttctttcaatc
aatcctcttgtgtgttctccattccgtggggattttgatggtgattgccttcatggttat
gttccgcaatcaatcgattctagggttgagcttagtgagcttgttggtctgaatcggcag
cttatcgacggacagagtggccaaaatcttctttcgttaagtcatgacagcttaactgct
gctcatttagttttggaagaaggagttttcttggaccgtttccaggtgcagcagctacaa
atgttttgtcctcatcaagtggggatgcctgctattgtacaggcaccattaagaaacagg
agttattggactgggaaacagttattcagcttgtttttgccatcagaccttgactgtgat
tttccatcaaatggcgtctgtattagtgatggggaaattgtgacatcttccggtggttct
tcttggctgcgtgatgccagtgaaaatctcttttatagtcttgttaaacaccatggaggt
gacactcttgacctcctttatgctgcacaagcagttctttgtgagtggttgtcaatgagg
ggtcttagtgtttcattgtccgatctttacatctcttctgatccatattctcgagaaaat
atgattgatgaagtcttttgcggtttgcaagaggcagagcgactatcttatatccaactg
ctgatgtcgaggtataatcacgatttccttgccggaagcctagaagtaagccagaaagcc
atgggttttaatttggagtttatgtctatcatgcagcagaagtcagcttctctgagtcaa
gcttctgttagttctttcaagcatgtttttcgggatatccagaatttagtatataattat
gcaagcaaggagaattcgtttctggctatgttaaaagctgggagtaagggcaacctgcta
aaactggtccaacacagcatgtgtcttggtttgcagcagtctttggttccattatcgttt
agaatgccgcgtcgactttcttgtgatgcatggaataatcataaagcacatcttcctttt
gagaaagctcataatgttcctgaacgtcctggtccttacatcccgtgtgctgtggttgag
aattcatttcttgcgggtttgaatcctctagagtgtttcgtgcattcattgacaacccgt
gatagttcttttagtggacatgctgatgtttccggaacattgaaccgtaagcttatgttt
ttcatgcgtgatctgtacagtggatacgatggaacagtgagaaatgcttacgggaatcaa
attgtgcagttctcttactacagcgcagaacaaatttcttctacatataaccgtgcttct
catgcaattggtggccatcctgttggttcattggcagcctgtgccatttcagaagctgca
tacagtgctttggatctacctgtcggtgcacttgagccatcacctttactaaacctaaag
aaaatattggaagctggagtaaagagtaatagtagcgagaaaactgcaactctgtttctt
tcgagaagacttggcagatgggctcatggttttgaatatggagctatagaggtcaagggt
catctagaaaggcttcttctttcagatattgtttcaaccgtaatgatatgcttctcccct
gaaacatgtaaaagcactcacagtagtccctgggtttgtcattttcatatagataaggaa
tatgtgaagacaagaaggctgaagctgaaatcagtaatagatgctcttaatatgagatat
agatcaactagaatggaagctggaattgatcttccaagcctgcatataacatgcaaggat
tgttcagccgctgaaatgcaaaaagcgaattccaaaatttgcatcgcagttgctgtggtt
gagacctcaaaagattctttttcactactggatacacttcgtgatttggtgattccattc
cttcttgagactgtgatcaaaggtttctccgcatttaaaaaagttgatatcttatggaga
gagttgccaagtacatcaaaatcttccagaggctctaccggggaactatatttgcaggtc
ttcatgtcggaaagttgtgaccggaacaacttttggaatgcacttgtggatagttgcctc
catataatggatttgattgattgggagcggagtcatcccgataacgtccatgatctgact
gtagcctatggagttgatgtagcatggaagtactttctacgtaatctaaattctgctgtc
tctgaaactggcaagaaaatccttccggaacacttggtacttgcagcagattgtctcaca
gctacaggagaatttgttccgttgaatacaaaagggctggcacagcaaagaaagtgtgct
ggtgttatttcaccatttatgcaagcgtgcttttcgcatcccggggactcttttgttagg
gctgccaagacagaattaagtgatgatcttcaaggaagtctggaagcattggcgtgggga
aaaaccccttccacagggactggtttttcatttgacattatctattctgaaaagggatat
gagcctgctgcaccaacagatgtgtatgctctgctgggcaaccacgtcacatcaaataga
caaaaggtgaaggtcactcttgacgaagacaatgaaacggctgacaaggctcttgcacga
cgtctttgtaaacttgatgatctcaatacaaagagatgtaaaagccagtggtcaattgca
aatttgagaagtttcctttcattcaatgacataaagaagctctctcaggcattgaagcaa
atgttgtccaaatatgctattgatcgcgagttaagtgaagcagacaagtccatagtaatg
atggcattacattttcatcccagaaggagtgagaagatcggaaaaggagcaatggaaata
aagattggttaccacaaagaatatgaagattcccgttgctttatgttggtacgtacagat
ggaacagttgaagatttctcgtatcgtaagtgtctacaacatgctctggaactaattgct
cctcaaaaggcaaaaacctataaatggttgaatggagcatcgcgtggtcccactgcctca
tccttgcaaaatgaggtcaagtaa

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