Nicotiana tabacum (common tobacco): 107767657
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Entry
107767657 CDS
T04643
Name
(RefSeq) Fanconi anemia group J protein homolog
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107767657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nta03400
]
107767657
Enzymes [BR:
nta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107767657
DNA repair and recombination proteins [BR:
nta03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107767657
FA (Fanconi anemia) pathway
Downstream FA components
107767657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
Motif
Other DBs
NCBI-GeneID:
107767657
NCBI-ProteinID:
XP_016442220
UniProt:
A0A1S3XQT2
LinkDB
All DBs
Position
Un
AA seq
1279 aa
AA seq
DB search
MKNYKPAPPPSATQNPKSSIHVVHIGGIPVEFPYQPYGTQLAFMNRVIATLDRAHREGRS
HALLESPTGTGKSLSLLCSALAWQQKFKSKNLNLYSHLTHSKPDPQAVADPIGHGGGFIP
ETQPSGNPDTTSSAATNGENKKKNVAPKIFYATRTHAQIAQVIREYRKTSYRVQMAVLAS
RKHYCTNMNVRGEDNIDEKCKLIVKDREAGCSEFKNSHKVKGHPSLQKGGCHEAHDIEDL
VKVGQIVKGCSYFAARSMADDAELVFCPYSYIIDPVVRRAMEVDITGAIIILDEAHNIED
ISRDAGSVDIEEDTFLQLQMELEQLTLSDTMTYQPLVEMVQDILNWIDRKKNTLERHDFQ
HYFSCWTGDKALKELQEANVTKQCFPILQECASKAIKAASEAEPETAHLSGMAAAVLEGL
FTSLRYFFSGNGLHVCDYQLALQRHVKKSPGTAVGSWTHSFSLWCLNPAVVFREIADSCL
SVILTSGTLSPMNSFSSELGVTFGTSLEAPHVIDVESQFWAAVISRGPRNYPLNASFKNT
DSYAFQDALGISLEEICKIVPGGCLVFFPSYKLMEKLSTRWKETGQWARLNARKPLFVEP
RGNPEEFESVLKGYYSSINQKGKLMMGRKKKAKKSALSDSNPHEVSDENKKEGAAFLAVC
RGKVSEGIDFSDEKARVVIVVGIPFPNINDIQVSLKKKFNDIYKSSKNLLSGSEWYCHQA
FRALNQATGRCIRHRFDYGAVIFLDERFCEARNRAYISKWLRSSIRHFGSFDESIEELKS
FFRDVEERAGKAVISVQNSVIDVEENASLTKSVRTRQKNHKLSTYNVKGLKEEQNGALIS
QKAALLCQYSPINKTYNTSSTKMKVHAPHLMLSDDEDGRRGYIDLECDSEKSPRFSGDPL
IPTDLDLTIVKETPCPDDIIHVSSPQSFSKDEYSSSTIIQASGELSDHLANHPVTQQNTA
LGCKSSCLMLTPEKDVCTKANRMSCDVESSINSSVNSHVGKRIKRLDLSSIVHLRAEEFD
IQMTNTPMHDSFTCRSRKIKDAYQRIDSGSRISPLDKEPEKSKFPRSPVLNNCDTSVVQS
KLAMLERLQIFCSLCENPLGLPENNLFVMCSRTSSTKTHLKSLWKGQLETPDPSRHSIPI
LVANFSSVDQRIYERTSDSLSVQGIWCKEDGCVFKTIFCPFCVNSRHCLGVQVMASDAAN
VQLLNKVLLYCDCLVIKEPEASRKELSPSTNSSSDRGGINSIESFSFTQQQNLGGWRTTK
SKMRLPKRSISSSVQTDVE
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattataagccagcaccaccgccgtcggcgactcaaaaccctaaatcctcaata
catgtggtgcatattggcggcattccggtggagttcccataccaaccctacggtacacag
ctcgctttcatgaatcgagtcattgccacacttgatcgagcacatagggagggtcgttct
cacgcgctgctagaatctcccaccggtactggaaagtcgctgtccttgctttgctcagct
cttgcttggcaacagaaattcaagtctaagaatcttaatctttattctcatctcacccac
tccaaacccgatcctcaagccgttgctgatcctattggtcatggcggcggttttattcct
gaaacgcagccctcagggaacccggatacaacatcatcggctgcaactaatggggagaac
aagaagaaaaatgtggcgcctaaaatcttttatgccacgaggacacatgcacaaattgct
caagtgattcgggaatacagaaagacaagttatcgggtgcaaatggctgtgctggcttca
cgaaaacactactgtacaaatatgaatgtacgaggtgaagacaacattgatgagaaatgc
aagttaatagtgaaggatcgagaggctgggtgctcagaattcaaaaattctcataaagtc
aaaggtcatccatcccttcagaaaggagggtgccacgaggctcatgatattgaagatctt
gttaaagttggacaaattgttaaaggctgctcatactttgcagcgcgctccatggctgat
gatgcggaattagtgttctgtccatacagctatatcatcgatccagttgttaggagagca
atggaagtagatataacaggggccatcattattctcgatgaagcccacaatatagaggac
atttctcgtgatgctggtagtgtggatattgaggaggatacttttcttcagttgcagatg
gaactggagcaactcacactatctgatactatgacttaccaacctttggtagaaatggta
caggacatactgaattggattgataggaagaaaaatactttagaaaggcacgacttccaa
cactatttctcatgttggacgggtgacaaggccttgaaagagctacaagaagccaatgtg
acgaagcagtgctttcccattttacaagaatgtgcctcgaaggccatcaaagctgcttct
gaagctgagccagagacagctcatttgagtggcatggcagcagctgtattagagggacta
ttcacctcacttcgttacttcttctcgggaaacgggcttcatgtgtgtgattatcagcta
gctttacaacgacatgtcaagaaaagtcctggaactgctgttggtagctggacgcattct
tttagtttgtggtgcttaaatccagcggttgtgttcagagaaattgctgattcttgtctg
tcagtgattctaacatcagggactctatcaccaatgaattcattttcctctgaacttggt
gttactttcggtacttctctggaagctccacatgttatagatgttgaatcacagttttgg
gctgctgtaatctcgagaggaccaagaaattatccgctgaatgcaagtttcaaaaataca
gattcatatgcttttcaggatgcccttggcatatctttagaggaaatatgcaagattgtt
ccaggtggttgtcttgtattctttcctagctataagctgatggagaaattaagcactcgc
tggaaagaaacaggtcaatgggcccgacttaatgctcgaaagccccttttcgttgagcca
agagggaatccagaagaatttgaatcagttttgaagggttactacagctctattaaccaa
aaggggaagctgatgatgggaagaaagaaaaaggcaaaaaagtcagctcttagcgacagt
aatccacatgaagtttcagatgaaaacaagaaagagggagctgcttttcttgctgtttgt
cgaggaaaggtttctgaaggcatagacttttccgacgagaaggctcgtgtagtcatagtt
gtaggcattccctttccaaacataaatgatattcaagtctctcttaagaagaagttcaat
gatatttataagtcatccaaaaatcttctgagtgggagtgagtggtattgtcatcaagcc
ttcagagctctcaaccaggctacaggtcgttgcatacgccatagatttgactatggagct
gtgatctttttagatgagcgtttctgtgaggcaaggaatagagcttatatttcaaagtgg
ttgcggagttcaataagacacttcggcagctttgacgagtcaatagaagaactgaaatcc
tttttcagagatgtcgaagagcgtgctggcaaggcagtcatttccgtacagaattctgtt
attgatgttgaagaaaatgcttctctaactaagagcgtaagaaccaggcagaaaaatcat
aagttgagcacttataatgtgaaagggcttaaggaagaacaaaatggtgcattgattagt
caaaaagctgctctcctatgtcaatattcacctattaataaaacgtataatacatcctcc
acaaaaatgaaagttcatgctccgcatttgatgttaagtgatgacgaggatggtcgcaga
ggttacattgatttggaatgtgattcagaaaaatcacctaggttttctggagatccattg
atccccactgacctcgacttaaccattgtaaaagaaactccttgtcctgatgacattatt
cacgtttctagtcctcaatccttctccaaggatgaatattctagctcaaccattattcaa
gcatctggtgagctctcagaccacttggcaaatcatcctgtaactcaacaaaatactgcg
ttgggttgtaaatcttcctgtttgatgcttactcctgaaaaagatgtttgtaccaaagca
aacaggatgtcgtgtgatgttgaatcatcaattaactcaagcgtcaattctcatgtgggt
aaaaggataaaacgtttggatttgtcatccattgttcatctccgtgcagaagaatttgat
attcagatgaccaacactccgatgcatgatagttttacatgtagatcaaggaagattaaa
gatgcataccagcgaattgattctggttccagaattagtccgttagacaaggaaccggag
aagtccaaatttccgaggtctccagtcctgaataactgtgatacatcagttgtgcagtct
aaacttgctatgctggaaagactacagatattttgctcactttgtgaaaatccactgggg
cttcctgagaataatttatttgttatgtgctcacgaacttcgtcaacaaaaactcacttg
aaatctctttggaagggccaattagaaacccctgatccgagcagacatagtatacctatt
cttgtagctaacttttcgtctgttgatcaacgcatctatgaaagaaccagtgacagttta
tctgtacaggggatttggtgcaaagaagatggttgtgttttcaaaactattttctgcccc
ttttgtgtaaattccagacattgtcttggtgtacaggtcatggcttctgatgcagctaat
gtccagttactaaataaggtgctgctttattgtgattgcttggtgataaaagagcctgaa
gcgtcaagaaaggaattatctccgtccaccaattcaagctctgatagaggaggtattaat
tccattgagagtttctcatttactcagcagcagaacctcggaggatggagaactacaaaa
tccaagatgcggttaccaaagaggagcatctcatctagtgtacagactgatgtagaatga
DBGET
integrated database retrieval system
