Nicotiana tabacum (common tobacco): 107791556
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Entry
107791556 CDS
T04643
Name
(RefSeq) squalene synthase-like
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
nta
Nicotiana tabacum (common tobacco)
Pathway
nta00100
Steroid biosynthesis
nta00909
Sesquiterpenoid and triterpenoid biosynthesis
nta01100
Metabolic pathways
nta01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nta00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
107791556
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
107791556
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nta01006
]
107791556
Enzymes [BR:
nta01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
107791556
Prenyltransferases [BR:
nta01006
]
Terpene biosynthesis
Squalene/phytoene synthase
107791556
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
107791556
NCBI-ProteinID:
XP_016469126
UniProt:
A0A1S3ZXV5
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All DBs
Position
Un
AA seq
411 aa
AA seq
DB search
MGSLRAILKNPDDLYPLVKLKLAARHAEKQIPPSPHWGFCYSMLHKVSRSFALVIQQLPV
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILISFHQHVYDREWHFSCGTKEYRVLMD
QLHHVSTAFLELGKHYQQAIEDITMRMGAGMAKFICKEVETTDDYDEYCHYVAGLVGLGL
SKLFHTSGKEDLASDSISNSMGLFLQKTNIIRDYLEDINEVPKCRMFWPREIWSKYVNKL
EELKYEDNSAKAVQCLNDMVTNALSHVEDCLTYMSALRDPSIFRFCAIPQVMAIGTLAMC
YDNIEVFRGVVKMRRGLTAKVIDRTRTMADVYGAFFDFSCMLKSKVNNNDPNATKTLKRL
DVILKTCRDSGTLNKRKSYIIRSEPNYSPVLIVVIFIILAIILAQLSGNRS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgagggcgattttgaagaatccagatgatttgtatccattggtaaagctg
aagctagcggctcgacacgcggagaagcagatcccgccgtctccacattggggcttctgt
tactcaatgcttcataaggtttctcgtagctttgccctcgtcattcaacaacttcccgtc
gagcttcgtgacgccgtgtgcattttctatttggttcttcgagcacttgacactgttgag
gatgataccagcattcccaccgatgttaaagtacctattctgatctcttttcatcagcat
gtttatgatcgcgaatggcatttttcatgtggtacaaaggagtacagggttctcatggac
cagttgcatcatgtttcaactgcttttctggagcttgggaaacattatcagcaggcaatt
gaggatattaccatgaggatgggtgcaggaatggcaaaattcatttgcaaggaggtggag
acaaccgatgattatgatgaatattgtcactatgtagctgggcttgttgggctaggattg
tcaaaactgttccatacctctgggaaagaagatctggcttcagattctatctctaactcc
atgggtttatttcttcagaaaacaaacatcattagagattatttggaagacataaatgaa
gtacccaagtgccgtatgttctggccccgtgagatatggagtaaatatgttaataagctt
gaggaattaaagtacgaggataactcggcgaaggcagtgcaatgtctcaatgacatggtc
actaatgctttatcacatgtagaagattgtttgacttacatgtctgctttgcgtgatcct
tccatctttcgattctgtgctattccacaggtcatggcaattgggacattagctatgtgc
tacgacaacattgaagtcttcagaggagtggtaaaaatgagacgtggtctgactgctaag
gtcattgaccggaccaggactatggcagatgtatatggtgctttttttgacttttcttgt
atgctgaaatccaaggttaataataatgatccaaatgcaacaaaaactctgaagaggctt
gacgtgatcctgaaaacttgcagagattcgggaaccttgaacaaaaggaaatcatacata
atcaggagcgagcctaattacagtccagttctgattgtcgtcattttcatcatactggct
attattcttgcacagctatctggaaaccgatcttag
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