Nicotiana tomentosiformis: 104099688
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Entry
104099688 CDS
T05025
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03020
RNA polymerase
nto03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104099688
09124 Replication and repair
03420 Nucleotide excision repair
104099688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104099688
03400 DNA repair and recombination proteins [BR:
nto03400
]
104099688
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104099688
DNA repair and recombination proteins [BR:
nto03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104099688
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
104099688
NCBI-ProteinID:
XP_009605052
LinkDB
All DBs
Position
Unknown
AA seq
318 aa
AA seq
DB search
MEGVSYQRFPRIKIREVKDDYMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFISHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFYLRVKCLSDQTLDV
TSKDLLSSDHTVVPVDYSDASSGFDNSTNKGIIIVKLRRGQELRLRAIARKGIAKDHAKW
SPAATVTFMYEPDIYINEDMMETLTLNEKRELVDSSPTKVFGIDPENKVIVVDPEAYTYD
DEVLKKCEAMGKPGLIEIHAKEDSFIFTVETTGAVKASQLVLNAIEVLKQKLDAVRLSDD
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgtctcgtaccagagattcccaaggatcaaaatacgtgaagttaaagatgac
tatatgaaattcgaactgcgcgacaccgatgccagcatagccaacgcgcttcggcgcgtg
atgattgcagaagtcccaacaatcgccattgacctcgttgaaatcgaggtcaattcctct
gttctcaacgacgagttcatatctcatcgtctggggctcatcccgctcactagcgagcgc
gccatgagcatgcgtttctcgcgtgactgtgacgcgtgtgacggtgacggacagtgcgag
tattgttccgttgagttttacctccgtgtgaagtgccttagtgaccagacgctcgatgtt
actagcaaggatttgctgagttcggatcatactgttgttcctgtcgattattccgatgct
tcctccggttttgataattctaccaataagggaatcataattgtgaagctacgacgtggg
caggagttaaggctaagagcaatagcacgaaaaggaattgccaaagatcatgcgaaatgg
tctcctgcagcaactgtgactttcatgtatgaaccagatatctacatcaatgaggacatg
atggagaccttgactctcaatgagaaaagagaattagtagacagtagtcccacgaaagtc
tttggcattgatcctgaaaacaaggttattgttgttgatcctgaggcatacacttacgat
gatgaggtgcttaagaaatgtgaagccatgggaaaacctggacttatagagatacatgcc
aaggaagatagttttattttcactgttgaaacgactggcgcagttaaagcttcacaattg
gtactcaatgcaatagaagtgctgaagcagaaattggatgcagtacgcctttcagatgac
accgtggaagcagatgatcagtttggagagttgggtgcacatatgcgcggagggtaa
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integrated database retrieval system
