Nicotiana tomentosiformis: 104099855
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Entry
104099855 CDS
T05025
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104099855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nto03021
]
104099855
Enzymes [BR:
nto01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104099855
Transcription machinery [BR:
nto03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104099855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Myosin_head
DUF6322
Motif
Other DBs
NCBI-GeneID:
104099855
NCBI-ProteinID:
XP_009605274
LinkDB
All DBs
Position
Unknown
AA seq
1938 aa
AA seq
DB search
MAPVRLKLLWCLYAIFAYFGGHRTIKRRVVEQLVLKSYPVLDALGSSKTIRNTNSSHQSI
IVEIQFVRNRRTTGVATKEEIKRCHLGDPESFDHRNHFKFYELLAVRDGWDIFETRMAMK
IIGSSKKEQEAILRMVAFVLLLAARDTHSSLAKLTIMISVLICSNLEYKVFIEVRKPDRC
LQLLIVVLFFEQNIESPLNSLLQHLLKNKKEKRSRTELFQQDVKLINVKNMPTIIQNNEQ
EKRSLRRFTRFVASSLPPLKRALPSVESPQQDSNSAVMLDITHLSPKMFKNNCLKALNCV
AAPQFFLLISLFNDLFRCKSCGQGTVHCPGHCGHIELVSPVFNPLLFNMLHNLLQRTCFY
CFHFRASKEEVEKCVSELELIAKGDVIGAKTMDVLSPDNSADREESEGSHMSCTTDDLNL
QDRSEYNKRPSWDNFQFTEAMAVIDRILKTKSEKCSNCETKNPKINKPSFGRFHMDISSK
QIIFNYIKKSQTFNLQCTGGSEENLSPEVVNATEPLGEAETSLSMASSGRLENSMARGRQ
GDEESIVMQQKDLFSVAHLPSQVRKIIEHLWENEARLCAFFCNIQGQHLNTPIKVAGPSM
FFLESILVPPIRFRPPAKGGDSVMEHPHTVLLGKVLQSNIALGNAHSNQAGRSKIISRLM
DLQQSVNVLFDSKTAAGPGQKDVGVGICQLLEKKEGIFRQKMMGKRVNFACRSVISPDPY
LSVNEIGVPPYFALRLTYPERVTPWNAGKMRDAIINGPENHPGALSFADRISTVKLPSGN
GTNIKKIRMAISRKLPSSRGAVTQSGRNDEYEFEGKVVYRHLQDGDIVLVNRQPTLHKPS
IMAHVVRVLKGEKTLRMHYANCSTYNADFDGDEMNVHFPQDEISRAEAYNIVNANEQYIV
PTKGDTVRGLIQDHIVGAVLLTMKNTFLTLQEFNQLLYGSGVFAAGPGSTSGNHSNKVSV
VDSEGVVQTILPAVWKPKPLWTGKQVITALLNHLTKGSPPCTVKNKGKIPYPYFLSLSRL
AEYQSREEEEDRTAENKFLIWKNELVRGVIDKAQFGKFGLVHTIQELYGANKAGILLSAL
SRLFTIFLQLHGFTCGIDDLVILPHYDIRRKEELEGGDVGEEAHCDFVKFKPGEIGPLEL
QLEIEKAISSNKEAATAALDMKMKNKLANKGSQFNKELLLKGLLKPFPRNCIALMTITGA
KGSTVNFQQISSYLGQQELEGKRVPRMVSGKTLPCFPPWDFASRAGGYVSDRFLSGLRPQ
EYYFHCMAGREGLVDTAVKTSRSGYLQRCLIKNLESLKVCYDYTVRDADGSIIQFYYGED
GVDVHRTSFLKNFKALKDNQETICQKLRQGRKLNSYIERLPDGLEEKVKQFWGKKAKKLE
KKLEKQVKKEEISKQLKKEEVDFLELVGQKYFSSLADSGEPVGVLAGQSVGEPSTQMTLN
TFHLAGRGEMNVTLGIPRLQEILMTASDAIKTPIMTCPFLGWKSKDDAQSLLAEVKKITV
ADMIESMEVNLLPLSIYNHQVSQLYKLTVKLKEHEFVSSEDCDYTLKYVFLRELEDAIES
HLALLSKINGIKNFKSSSDSVASHETEENASSTRHEEEMLDDDDEAEDERTEEDLSSDAQ
KRKQQTTDEMDYDDGPEDEASEAETTAEVEDEKSDQTHEIGNRDEEETGDHGNEEQTSKL
HSEESNIKTAKSKTKTTVQQKKKKETRSKKDSDRSVFIAVEGLHFEVHFRFVNEPHILLA
QVAQKTAKKVYIKNAGKIEQCRMVKYDVSENTVMWDVKQIKNQSQDTDSAYWALKAAGVD
FGTFWEMQDDIDVNRIYTNNIRSMLNTYGVEAARAAIIREVKTVFGIYGVEIDFRHLSLI
ADYMTHTGGYQPMSRHGSISESLSPFLKMSFETASKFIVEAASHGLTDNLETPSSRICLG
LPVKMGTGCFDIMQKLDI
NT seq
5817 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggtaagactgaaactgctatggtgtttatacgcaatctttgcctattttggt
ggtcatagaaccattaaaaggcgggttgtggaacaactagttttgaagtcatatccagtt
cttgacgcacttggcagttccaaaacaattagaaataccaactcaagccatcaaagtata
attgtggagattcagtttgtccgaaatagaaggacaactggtgtagcaaccaaggaggag
atcaaaaggtgtcatttgggggatccagaatcatttgaccatcgcaatcattttaaattc
tatgaactcctagctgttcgtgatggttgggatatttttgagactaggatggctatgaaa
attattggtagtagcaagaaagagcaggaggcaattttaagaatggtggcatttgttctt
cttcttgctgcccgtgacacacattcgagcctcgccaagctcactattatgatatcagtg
ttgatctgttcgaaccttgagtacaaggtttttattgaggtcagaaaaccagatagatgt
cttcagctcttgattgtcgtactattcttcgaacaaaatattgagagccctcttaatagc
ctgctgcaacaccttttgaagaacaagaaagaaaagagatcgagaacagagctgtttcag
caagatgtgaaacttattaatgtgaagaacatgcctactattatacaaaataatgaacag
gagaagcgatcgcttcgtcgctttactcgcttcgtcgcttcgtcgcttcctccgttgaag
cgtgcgcttccctcggtcgagtcgcctcagcaagacagtaactcagcagtaatgcttgac
atcacccatttaagtcccaagatgttcaagaataattgcctcaaggccctcaactgcgtg
gcagctccgcagttctttctgttgatttcgctatttaatgacctgttcagatgtaagtca
tgtggtcaaggtacagttcactgccctggtcactgtggtcatattgaacttgtttcgccg
gtcttcaatcccctgcttttcaatatgctgcacaatcttctgcaacgaacatgcttttat
tgctttcattttagggcatcaaaagaagaggttgaaaagtgtgtctctgaattagagtta
atcgcaaagggtgacgttattggggccaaaaccatggatgttctctctcctgataactct
gctgatcgggaggaaagtgaagggagccatatgtcatgtacaacggatgatttaaatttg
caagatcgttctgagtacaataagaggccatcttgggacaatttccagtttactgaagct
atggcagttatcgatagaattctcaagactaaatctgagaaatgcagcaattgtgaaact
aaaaatccaaagatcaataaaccgagttttggacggtttcatatggatatttcaagtaag
caaattattttcaattatatcaaaaaaagtcaaacgttcaatctgcagtgcactggtgga
agcgaggaaaatctttcccctgaggtggtaaatgccactgagccattaggggaagctgaa
accagcttatctatggcttcctcgggtagattagaaaattctatggcacgtggaaggcaa
ggggatgaggagtctattgtgatgcaacagaaagacttattttcagtagctcatttaccg
tctcaggtcaggaaaattatagagcatttatgggaaaacgaagctcgtctgtgcgcattc
ttctgtaatattcagggtcagcaccttaatacacctatcaaggtggctgggccctctatg
ttctttttggagtccattcttgtacctccaatcaggttccgtcctccagccaaagggggt
gattcagttatggaacatccacatactgttcttcttggcaaggtccttcagtcaaatata
gctttgggaaatgcccatagcaaccaggctggaaggtctaagatcattagccgcttgatg
gatcttcaacaatctgtaaacgtgctgtttgatagcaaaacagctgctggtccaggtcaa
aaagatgttggtgtgggcatatgtcaattgttggaaaagaaagaaggtatcttccgccag
aaaatgatgggaaagagagtcaattttgcctgccgatcagttatatctccggatccgtat
ttgtctgtcaatgaaattggagttccaccatattttgctttaagactaacctatcctgag
agggtgactccttggaatgctggtaaaatgagagatgctatcattaacgggcctgaaaac
catcctggggctctctcttttgctgatagaatatctactgtgaaactgccgtcaggcaat
ggtacaaatataaaaaaaatccgtatggcaatatctagaaaattgccttcttcaaggggg
gcagtgactcagtctgggaggaacgatgagtatgaatttgaaggcaaagttgtttaccgg
cacttgcaggatggggatattgtccttgtgaatcggcagcctacgctacacaagcccagt
ataatggctcatgttgtccgtgtactgaaaggagaaaaaactcttcgcatgcactatgct
aattgcagtacctataatgccgattttgacggtgatgaaatgaatgtccactttccacaa
gatgaaatttctcgtgctgaagcatataacattgtaaatgctaacgaacagtacattgtt
ccgactaagggagatacagttagaggcctgattcaggatcatattgtaggtgcagtgctt
cttaccatgaagaatacttttttaacccttcaagagttcaaccagcttctgtatggatct
ggtgtgtttgctgctgggcctggttcaacttctggaaatcattcaaataaagtttctgta
gtagattctgaaggtgttgtacaaactatcttgcctgctgtctggaaaccaaagcctctt
tggacagggaagcaggtcatcactgcattactaaatcatctgacaaagggtagtccacct
tgtactgtgaaaaacaaagggaaaattccatatccgtatttcctgagcctgagtcgccta
gctgagtatcagtcaagagaagaagaagaagatagaaccgctgaaaataagttcttaatt
tggaaaaatgagcttgtgcgtggtgtaattgacaaggctcagtttggaaaatttggttta
gttcatacaattcaggagctttatggggccaacaaagcagggattttactttctgctctg
agtcgtttatttactattttcttgcagcttcatggcttcacttgtggtattgatgatctt
gtcatcttaccacattacgatattcggaggaaggaggaacttgaaggaggggatgttgga
gaggaggctcattgtgattttgtgaagttcaagcctggagaaataggccctttggagctc
caactggaaattgagaaagccataagcagcaataaagaagctgccacagcagccttagat
atgaagatgaaaaataaattggcaaataaaggctcacaatttaataaagagttgctgcta
aagggattgctgaaaccttttcccagaaactgcattgcccttatgacaattactggggca
aaggggagtacggttaattttcaacaaatttcctcttatctgggccaacaagagttggaa
ggaaaacgagtgccacggatggtttctggaaagacattgccctgttttccaccatgggat
tttgcttctagggcaggaggctatgtcagtgatcggtttctttctggacttcgtccccag
gagtactactttcattgcatggctggtcgtgaaggattagttgatactgctgtcaaaaca
tctcgcagtggatatctacaaaggtgcttgataaaaaatctggaatctcttaaagtctgt
tatgattatactgtccgtgatgcagatggttcaattatccaattttattatggagaagat
ggtgttgatgtacatcgaacaagttttctcaaaaacttcaaagcactgaaagataatcaa
gaaactatttgccaaaagttgcggcaaggacggaagctcaattcctatattgaaaggttg
cctgatggcctggaagaaaaagtgaagcaattctggggtaaaaaagcaaaaaagttagag
aagaaactagagaagcaagtgaagaaggaagagatatcgaagcaactgaaaaaggaggag
gtggactttctagaattagtgggacaaaaatacttctcaagtttggcagattcaggagag
ccagttggtgtccttgctggtcagtctgtaggtgaaccgtcaacccagatgacactgaac
acttttcatcttgccggccgtggagaaatgaatgtcactcttggaattccacgtcttcag
gagattctgatgactgcctctgatgctattaagactcccatcatgacgtgccccttcctt
ggctggaaatcaaaggatgatgcccagtctcttttggccgaagtgaagaagatcactgtc
gctgatatgattgagagtatggaagttaatcttttgccactgtcaatatacaaccatcaa
gtttctcaactttacaagctcacagttaagctcaaagagcacgagtttgtgtcatcagaa
gattgtgattataccctaaaatatgtgttcttaagggagttggaggatgcaatagaaagt
catttggccttgctctctaaaattaatggtataaagaacttcaagtcaagctcagactca
gtggcttcacatgagactgaagaaaatgcttccagcaccagacatgaagaagagatgttg
gatgatgatgatgaagctgaggacgaaagaactgaagaagatcttagttcagatgcacaa
aaaagaaaacagcaaaccactgatgagatggattatgatgatggtcctgaagatgaagct
agtgaagctgagaccactgctgaagttgaagatgagaaaagtgaccaaacacacgagatt
ggaaatagggatgaagaggaaactggagaccatggcaatgaagagcaaacgtctaaattg
cactctgaggaatcaaatatcaaaacagctaagtcaaagaccaaaacaactgtccaacag
aagaaaaagaaggaaacacgtagcaaaaaggattcagacaggtctgtctttattgctgtg
gagggattgcattttgaggtccactttagattcgtcaatgaacctcatatcttgttagct
caggttgcccaaaagactgcaaagaaagtatatattaagaacgccggtaaaatcgagcaa
tgcagaatggtcaagtatgatgttagtgaaaatactgtgatgtgggatgtaaagcaaata
aagaatcaaagccaagacactgattctgcttattgggccctgaaggcagctggagtagat
tttggtaccttttgggaaatgcaagatgacattgatgttaatcgaatatacacaaataat
attcgctctatgctgaatacttatggcgttgaagctgctcgggcagcaatcatacgagag
gttaagactgtttttggaatatatggggttgagattgatttccggcatttgagcctaata
gctgactacatgactcatacgggtggataccagccaatgagcagacatggaagcatatcc
gagtctttgtcaccgttccttaagatgtcttttgaaacggcatcaaaattcatagttgaa
gcagcatctcatggtttgactgacaacttggagacaccatcctccagaatttgcctaggg
ttgccggtgaaaatgggtactggttgttttgacataatgcagaagctagatatttga
DBGET
integrated database retrieval system
