Nonlabens ulvanivorans: R1T42_01265
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Entry
R1T42_01265 CDS
T09493
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nul
Nonlabens ulvanivorans
Brite
KEGG Orthology (KO) [BR:
nul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nul03009
]
R1T42_01265 (rimO)
Enzymes [BR:
nul01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
R1T42_01265 (rimO)
Ribosome biogenesis [BR:
nul03009
]
Prokaryotic type
ribosomal protein modification factors
R1T42_01265 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
TRAM_2
Radical_SAM
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WOI23079
LinkDB
All DBs
Position
294111..295415
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AA seq
434 aa
AA seq
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MRTKSRKKNKINVITLGCSKNVYDSEVLMGQLKASGKDVVHEEEGNIVVINTCGFIDNAK
EESVNTILDFVERKNNGEVDQVFVSGCLSERYKPDLQKEIPDVDQYFGTTELPSLLKALG
ADYKHELIGERVTTTPKNYAYFKIAEGCDRPCSFCAIPLMRGGHKSTPIEHLVIEAEKLA
ANGVKELILIAQDLTYYGLDLYKKRRLADLLKELVKVEGIEWIRMHYAFPTGFPMDVLEV
MKSEPKVCNYLDIPLQHISTPVLKSMRRGTTFEKTNALLEDFRATVPEMAIRTTLIVGYP
GETEEDYQILKQWVKDQRFERMGCFTYSHEENTHAYKLEDDVPEEVKQERANEIMEIQSQ
ISWELNQHKIGQTFKVIIDRKRGNYFVGRTEFDSPDVDNEVLIDAEKHYLSVGSFVNVTI
TEAEDFDLYGTPVE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaaatcaagaaaaaagaataagattaatgtcatcactctaggatgttcaaag
aacgtctatgatagtgaagtgttgatgggacagttgaaggccagtggcaaagatgtggtt
catgaagaagaagggaatatcgttgtgataaatacctgtggttttatcgataatgctaag
gaagaatctgtaaatacaatcctagattttgtagagcgcaaaaataacggagaagtagat
caggtatttgtgtcaggttgtttatcagagcgttataagccagatttgcaaaaggaaatt
ccagatgtggatcagtattttggtaccacagagttgccatcattattaaaagcgctagga
gctgactataagcacgagttgataggtgaacgtgtaactacgactcctaaaaattatgcg
tattttaaaatcgccgaaggttgtgatagaccatgttctttttgtgcaataccattaatg
cgtggtggtcataaaagcacacctatagaacacctggtcattgaagctgaaaaactggct
gcaaatggtgttaaagagcttattcttatcgctcaagatttaacttattatggactagat
ttatataaaaagagacgtcttgcagatcttttaaaagaactggtgaaagtagaaggaata
gagtggatacgcatgcactatgcattcccaactggtttccctatggatgttcttgaggta
atgaaatcagagcctaaagtgtgtaattacttagatataccattacaacatatttcaaca
cctgttttaaaatcgatgcgtcgcggtactacatttgagaagactaatgcgcttctagaa
gattttagagcgacggttccagaaatggctatacgtactactttaattgtaggatatcct
ggagaaacagaagaggattatcagattttaaaacaatgggtaaaagatcaacgttttgag
cgtatgggatgttttacatactctcatgaggagaatacacatgcatataagttagaagat
gatgtaccagaagaagtaaaacaagagcgtgcaaacgagatcatggaaattcaatcacag
atttcttgggaattgaatcagcataaaataggtcagacttttaaagttattatagatcgc
aaaagaggtaattattttgtaggacgtacagagtttgatagtcctgatgtggataatgaa
gtattgattgatgcagagaagcattacctgtctgtaggatcatttgtaaatgttactata
actgaggcagaggattttgatctttatggtacgccagtagagtag
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