Nitrosomonas ureae: ATY38_00750
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Entry
ATY38_00750 CDS
T04188
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nur
Nitrosomonas ureae
Brite
KEGG Orthology (KO) [BR:
nur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nur03009
]
ATY38_00750 (rimO)
Enzymes [BR:
nur01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ATY38_00750 (rimO)
Ribosome biogenesis [BR:
nur03009
]
Prokaryotic type
ribosomal protein modification factors
ATY38_00750 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ALQ52453
LinkDB
All DBs
Position
complement(138085..139464)
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AA seq
459 aa
AA seq
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MSAGKQFPQKVGFVSLGCPKALVDSEQILTQLRAEGYEISASYQDADLVVVNTCGFIDSA
VEESLDAIGEALAENGKVIVTGCLGAKEDGDVVKKAHPQVLAVTGPHALPEVMSAIHTHL
PQPHDPYTSLIPPHGIRLTPKHYAYVKISEGCNHRCTFCIIPSMRGDLVSRPIHQVMQEA
EHLVNAGVKELLIISQDTSAYGVDVKYRTGFWQGRPVKTRLTELAYALGSLGVWIRLHYV
YPYPHVDAVIPLMAEGKILPYLDVPFQHANPRILKMMKRPASAENNLARIQQWREICPDI
TLRSTFIVGFPGETEAEFEDLLAFLQEAQLDRVGCFTYSPVEGATANQLSDHIPEAIKQE
RRARFMQQQEEISRQRLAAKVGHTMTVMIDELTESQVIARSSADAPDIDGVVYVENAGHL
QPGELIDVQISGSDAHDLFAVMLNRDPSQQGGFPNSEMH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggcaagcagtttccgcaaaaagttggttttgtctctctggggtgtcccaag
gccttggtcgattcagaacaaatattgacccagttgcgggcggaaggttatgaaatatcg
gcttcatatcaagatgcggacttggtcgtggtcaatacctgcgggtttattgatagcgcc
gttgaagagtcattggatgccattggcgaagctttggcagagaatggtaaggtgatcgtg
acaggttgtcttggtgccaaggaagatggggacgtcgtcaaaaaagctcatccgcaagtg
ctggcggttaccggaccgcatgcgctgccggaagtcatgtccgcgattcatacgcatttg
ccacaacctcatgatccctatactagcctgatacctccgcacggaatacggttaacaccg
aaacattatgcgtatgtgaaaatttctgaaggctgtaatcatcggtgtacgttttgtatt
attccatcaatgcgtggcgatttggtgagccgtccgattcaccaagtgatgcaggaagcc
gaacacttggtgaatgccggggtaaaagagctgttgattatttcacaggataccagcgcg
tacggtgttgatgtgaaataccgtaccggtttttggcagggaaggccggtgaaaacccgc
ctgaccgaacttgcgtatgctttggggtcgttgggagtatggataaggttgcattatgtt
tatccctatccgcatgtggatgcagtcattccgcttatggctgaaggcaagatattgccc
tacttggacgtgccatttcagcatgcaaatccgcgcattctcaaaatgatgaaacggccc
gcaagtgccgagaataatttggctcgaattcaacaatggcgggaaatttgccctgatatt
acattgcgaagcaccttcattgttggtttcccgggtgagaccgaggcggaatttgaagat
cttctggcttttttacaggaagcgcaattagaccgcgtaggctgctttacgtactctcct
gttgagggtgctactgccaatcagttgtctgaccatattcccgaggcaatcaaacaagag
cgtcgcgcccgtttcatgcagcagcaggaagaaatcagccgccaacgattggctgcgaaa
gtaggtcatacaatgacggttatgattgacgaattaactgagagtcaagtgattgcacga
agtagtgcggatgcgccggatattgatggagtggtttatgtggaaaatgctggacacttg
cagccgggtgagctcatcgacgtgcaaatttctggatcggatgcgcatgatttatttgct
gtcatgctaaatcgagatccttcgcaacagggtggttttccgaattcagaaatgcattga
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