KEGG   Nematostella vectensis (starlet sea anemone): 5502514
Entry
5502514           CDS       T01037                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
nve  Nematostella vectensis (starlet sea anemone)
Pathway
nve03020  RNA polymerase
nve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    5502514
  09124 Replication and repair
   03420 Nucleotide excision repair
    5502514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nve03021]
    5502514
   03400 DNA repair and recombination proteins [BR:nve03400]
    5502514
Transcription machinery [BR:nve03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     5502514
DNA repair and recombination proteins [BR:nve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      5502514
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta Zn_ribbon_recom Zn_Tnp_IS1595 DZR Lar_restr_allev
Other DBs
NCBI-GeneID: 5502514
NCBI-ProteinID: XP_001623697
UniProt: A7SXH3
LinkDB
Position
Unknown
AA seq 129 aa
MSSMFRSNSRSDGPGFVGIKFCQECNNMLYPKEDKDHKILLYACRNCDYQQEADNSCIYV
NKITHEVNELTQIVGDVIADPTLPRTEDHECPRCGHRESVFFQSQSSKADQMVLYYVCTS
VDCGHKWTE
NT seq 390 nt   +upstreamnt  +downstreamnt
atgtcttcgatgtttcgttcaaatagcagaagtgatggtcctgggtttgttgggatcaag
ttttgccaagaatgtaacaacatgttgtaccccaaggaagacaaagatcacaaaatacta
ctttacgcctgtcgcaactgtgactaccaacaggaagctgacaacagttgcatatatgta
aacaagatcactcacgaagtcaatgagttgacccaaattgttggggatgtcattgcagac
cccaccttaccccgaactgaagaccatgaatgcccaagatgcggtcacagggaatcagtg
ttttttcagtcacaatcaagtaaagcagatcaaatggtgttgtactatgtctgcacttct
gtggactgtggacacaaatggacagaataa

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