Nematostella vectensis (starlet sea anemone): 5508352
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Entry
5508352 CDS
T01037
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03020
RNA polymerase
nve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
5508352
09124 Replication and repair
03420 Nucleotide excision repair
5508352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nve03021
]
5508352
03400 DNA repair and recombination proteins [BR:
nve03400
]
5508352
Enzymes [BR:
nve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
5508352
Transcription machinery [BR:
nve03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
5508352
DNA repair and recombination proteins [BR:
nve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
5508352
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-GeneID:
5508352
NCBI-ProteinID:
XP_001628960
UniProt:
A7SHD8
LinkDB
All DBs
Position
Unknown
AA seq
1182 aa
AA seq
DB search
MSNVYDHDDDAGYGEDEGEDITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQ
RIVEDSPEIDLQAESQHMTSDTEIPARFVLKFEQIYLSKPTHWEKDGAPSPMMPNEARLR
NLTYSAPFYVDITKTRIKDNEEPQVTTHSKMFIGKIPIMLRSTYCLLNGLLDRDLTELNE
CPLDPGGYFIINGSEKVLIAQEKMATNTVYVFSKKDSKYSYTAEIRSCLEHSSRPTSTMW
VSMLAKGSSGGRRSAIGQRIVGSLPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDQE
MMEMVKPSLDEAFVIQEQNVALNFIGSRGARPGVTKERRIKYAKEILQKEMLPHVGVSDF
CETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRNLMKEVR
MYAQKFIDRGKDFNIELALKPKVITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFA
STLSHLRRLNSPIGREGKLAKPRQLHNTHWGMICPAETPEGHAVGLVKNLALMAYISVGS
QPSPILEFMEEWTMENLEEITPSAINTSTKIFVNGCWVGIHRDPDQLMSTLRKLRRRMDI
IVSEVSMVRDFREREIRIYSDAGRICRPLLIVENQKLLLKKNHIDQLKEREYNEYSWQEL
VANGIVEYIDVNEEETVMVAMTPDELVEKGQAYCSTYTHCEIHPSMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNYHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGI
NAIVAIASYTGYNQEDSVIMNASAIDRGLYRSVFYRSYRDQESKKGLDQEETFEKPTRDA
VQGMRNASYDKLDEDGLIAPGIRVSGDDVIVGKTVTLPDNDDELEGTARKYSKKDASTFL
RPSETGIVDQVMVTINQEGFKFTKIKVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPF
TCEGLSPDVIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISQLLN
DYGYHLRGNEVLYSGFTGRKLNTQVFLGPTYYQRLKHMVDDKIHSRARGPLQILTRQPME
GRSRDGGLRFGEMERDCMIAHGSAQFLNERLFEVSDPYSCHVCNLCGLIAIANLRNNTFE
CRGCKNKTQVSRIRMPYAAKLLFQELMSMSIAPRMMVCDPVK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgtctacgatcacgatgatgatgctggatatggggaagatgaaggcgaggat
attactccagatttatggcaagaagcttgctggattgttatcagctcgtatttcgacgag
aaaggtctcgtacggcaacagttggattcattcgacgaattcatacagatgtctgtccaa
agaatcgttgaggattcaccagaaatcgacctacaagccgaatcacagcatatgacatca
gacacagagattcctgcaaggtttgtgctgaagtttgaacagatttacctgtctaagccc
actcactgggagaaagatggcgcccctagtccaatgatgcctaatgaagcacgtctacgc
aatcttacgtattctgcacccttttatgtcgacatcacaaaaacaagaatcaaagacaat
gaagaaccacaggtcacaactcacagtaaaatgttcattggcaaaatacccatcatgctt
cgttctacatattgcctgctaaatggactccttgacagggatttaacagaactgaacgag
tgtcccctcgacccaggaggatactttatcatcaatggatcagaaaaagtcctcattgcc
caggagaagatggcaaccaacaccgtctatgtattttccaagaaagactccaagtactcg
tatacggcagagattcgctcatgtctggagcattcttccaggccaactagcaccatgtgg
gtctctatgcttgctaaaggaagctctggtggccgcaggagtgcgataggtcagagaatt
gtaggatcacttccttacatcaagcaggagatccctatcatgattgtgttcagggctcta
ggatttgtggctgacagagacattttggagcatattatttatgactttgaagaccaagaa
atgatggaaatggtaaaaccatctctagatgaagcatttgtcatccaagagcagaatgtt
gcccttaatttcattggttcccgtggggctaggccaggtgttacaaaggaacgacgtatc
aaatatgccaaggaaattctgcagaaagaaatgcttcctcatgtcggtgttagcgacttt
tgtgagacaaaaaaggcttatttccttggatacatggtacatcggctgttgttggctgca
cttggtcgccgtgaactggatgatcgtgatcactatggcaacaagaggctggacctagct
ggtccccttcttgctttcttgttcagggggcttttcagaaacttgatgaaggaagtcaga
atgtatgcccagaaattcattgatagaggaaaggacttcaacatagagcttgcactaaag
cccaaagttatcacagatggcctgcggtattcccttgctacaggcaattggggagaccag
aaaaaagcccaccaagcgagagcaggtgtgtcacaggtgctgaacagactcacctttgct
tccacactctcccatctaaggcgtctgaactctcccattggtcgagaggggaagctggcc
aagccaagacagcttcataacactcattggggaatgatctgcccagctgagacacctgag
ggccatgctgttggcctggttaagaatctcgccttgatggcatacatttccgtgggctct
cagcccagtcctattcttgagttcatggaagagtggaccatggagaatcttgaggagata
acaccctcagccatcaatacctctaccaagatctttgtgaatggctgctgggtgggcatc
catcgggatcctgatcaacttatgagcacactaagaaaactcaggagacgaatggacatc
attgtatctgaggtctctatggtgcgggatttccgtgaacgagaaatcagaatctactcg
gatgcaggcagaatctgtcgacctcttctgattgtggaaaatcagaaacttcttttgaaa
aaaaatcatatcgaccagctgaaagaaagagagtataatgaatacagctggcaagagcta
gttgctaatggcattgtagagtacattgatgtgaatgaggaagagactgtcatggtggct
atgacgccagatgagctggtagagaagggtcaggcatactgttctacctacacacactgt
gagatccacccttccatgatcctcggagtgtgtgcttccatcatcccatttccagatcac
aatcagtctccacgtaatacctaccaatctgctatgggtaaacaagccatgggcgtgtac
atcacaaattaccatgtgcggatggacacattagcacatgtgctgtactatcctcaaaag
ccgctagtcaccacacgctccatggaatacttgagattcagggagctgccagctgggatt
aatgccattgtagcaattgcatcgtacactgggtataatcaggaggactcggttattatg
aatgcatcggccattgacagaggtctttacaggtctgtattctaccgatcgtaccgagat
caagagtctaagaaagggttagaccaagaagagacgtttgagaagcctacgagagatgct
gtgcagggtatgcgcaatgccagctacgacaagttggatgaagacggactgatagcaccg
ggaatacgtgtcagtggtgatgatgtgattgttgggaaaactgtcaccctcccagacaac
gatgatgagctcgagggaacagccaggaaatacagcaagaaagatgccagcaccttcctg
cggcccagcgaaactggaatcgtagaccaggtgatggttactatcaaccaggaagggttc
aagttcactaaaatcaaggtcagatcagtgcgagtcccgcagattggagataagtttgct
agtcgtcacgggcagaaaggaacatgcggtattacctacagacaagaggacatgccgttc
acgtgtgaaggactctcccctgatgtgatcatcaatcctcacgctatccccagtcgtatg
accattggtcatcttatcgagtgcctacagggcaaggtttctgctaacaagggcgagatc
ggcgatgcaactccgttcaacgacgctgttaatgtgcagaaaatctctcagcttctgaac
gactacggctaccatttgcgaggaaatgaggttctttacagtggcttcacgggtcgaaag
ttgaacacccaggtcttccttgggcctacgtattaccagcgtcttaagcacatggtggat
gacaagattcactcccgagcgcgtgggccgctccagatcttgaccagacagcccatggag
ggtcgatcacgtgatggcggtctgcgtttcggtgagatggagcgtgactgcatgattgcg
cacggctcggcccagttcctgaacgagcgtctgttcgaggtttccgacccgtacagctgt
cacgtgtgtaatctttgcggactcattgccatcgccaacctcaggaacaacacgtttgag
tgcagaggatgcaagaataagacacaggtatcccggatccgcatgccctacgctgctaaa
ctgcttttccaagaactgatgtcaatgagtatcgctccgcgcatgatggtgtgtgacccg
gtcaagtaa
DBGET
integrated database retrieval system
