Neodiprion virginianus: 124310385
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Entry
124310385 CDS
T09046
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
nvg
Neodiprion virginianus
Pathway
nvg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nvg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124310385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvg03021
]
124310385
Enzymes [BR:
nvg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
124310385
Transcription machinery [BR:
nvg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
124310385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
124310385
NCBI-ProteinID:
XP_046630216
EnsemblRapid:
ENSNVRG00000008430
LinkDB
All DBs
Position
1:complement(27129203..27136018)
Genome browser
AA seq
1123 aa
AA seq
DB search
MLIEPQLTNTRLDFGKPPTNQNPILQSLGAPHIDSFNYMLQDGIFEAVENLIPVHLLLAN
GDKIILTIEDVSISPPSLPTGTIGVKTHQIYPSECRQRGSSYKGKLTARIGWSVNGVPQE
TILKDLGTIPIMIKSNSCNLHKMSPSELVAHGEHEQEWGGYFLVKGLERIIRMLLMTRRN
YPIAIKRSGWKARGAQFSDLGLLLRSVRDDNTATTNSLHYVTDGTAKLMFAHRKILYYVP
LILMLKCLVDVSDKYIFSQLTTGYEDDLYFTGCVLNMLRTIHEEGLHSHEQCKAYLGKMF
RIKFYEVPQESPDSEISDFIIKHCVAIHLDNPMDKFNLLVFMAQKLFNLAGQKCAVEGAD
AVMMQECLLGGHLYLQVLKEKLQNWLSVLKLCIMKRPNSTSDKYKLTLQEMLAALKFSGT
FESQMENFISTGNIKSSTGLGLMQDTGLTIIAENINRMRYMSHFRAIHRGAFFQEMRTTE
ARQLLPDAWGFICPVHTPDGAPCGLLNHLTMNCIVTKHADKKLQANIPSVLLDLGMSPLA
TSENIRNSYIVMLDGKVIGRLQANIIEKVVNKLRILKIDGNKVPPTMEIVSVLKKDGPSQ
YPGLFLFTGPARMMRPVMNLLVKKIELIGTFEQVYMNICITTEEAYPGLTTHQELSKTSF
LSNLACLIPMPDCNQSPRNMYQCQMGKQTMGTPCHTWQLQTETKLYRLQTPATPLFRPVH
HDNINLDDFAMGTNAIVAVISYTGYDMEDAMIINKSAYERGFAHGMIYKSEFIDLKDPKS
YFGRDPDNSKLTDKLDPDGLPFSGSTIREGDPYYSYYDVDKSRYMIGTYTGKEFVYIDNV
KLCGTLNTKTPRRACITFRVPRNPSVGDKFASRAGQKGICSQKWPAEDLPFTETGLIPDI
VFNPHGFPSRMTIAMMIEVMAGKSAAVHGFVHDATPFRFTEEDTAVDYFGKLLEAGGYNY
YGTERMYSGIDGREMTADIFFGVVHYQRLRHMVSDKWQVRSTGPVDVLTRQPIKGRRRGG
GVRFGEMERDSLISHGCSFLLQDRLFHCSDKITTLVCQKCGTLLGPVTELVLNKMGMGDQ
RTRCRLCKDDGAVGEVEIPYIFRYLVTQLTSCNINIKLAISEK
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcgaaccacagttaacgaatacgaggctagatttcggcaagcctccaacgaac
caaaatcccattttgcagtccctgggggctccgcacatcgattcgttcaattacatgcta
caagacggcatttttgaagctgttgaaaatcttattccagtacacttactccttgccaac
ggcgataaaattatcttaactattgaagatgtctctatcagtcctccaagcttacctacc
ggaacaattggtgttaagactcaccaaatatatccatctgaatgtcgtcaaaggggatcc
tcttataaaggaaaactcaccgccaggataggatggtctgttaatggcgtacctcaggaa
accattcttaaagacttaggaacaattcccatcatgattaagtcaaattcttgtaatctg
cacaaaatgagtccgtcagaattagtagcgcatggagaacatgaacaagaatggggtggt
tacttcttggtaaagggtcttgagagaattatcagaatgttgctgatgactcgaagaaat
tatcctattgccatcaaaagatcgggatggaaagctcgtggagctcaatttagtgatctt
ggcctcctgttgagaagtgttagagacgataacacagccactacaaactcgttgcattat
gtaacagatgggactgctaagctcatgttcgcacatcgtaaaattctgtattatgttccc
ttaatcttgatgctgaagtgtttagttgatgtctctgacaaatatatattcagtcagttg
actactggctatgaggacgatctttatttcacaggttgtgtgcttaatatgttgagaaca
atacatgaagagggcttgcactctcatgaacagtgcaaagcatatttgggaaaaatgttc
agaataaagttttacgaggtaccacaggaatccccagactctgagattagtgattttatc
ataaaacactgtgttgctattcacctggataatcctatggacaaatttaatttattggta
ttcatggctcaaaagctttttaaccttgccggtcagaaatgtgcagttgaaggtgcagat
gctgtcatgatgcaagagtgcctccttggtggtcacttatacttacaagttttgaaggaa
aaattacaaaattggctttcagtgctcaagttatgcattatgaagcgtcctaacagcaca
agtgataaatataaattaacgttacaggagatgctggcagcattaaaattcagtggtacc
tttgaatcacagatggaaaatttcatatcaactggaaatataaaatcatctacaggactg
ggattaatgcaggatacaggtctcaccataatagcggagaatattaatagaatgcgttac
atgagtcattttagagccattcacaggggtgcatttttccaagaaatgagaactactgaa
gctaggcagctgcttcctgatgcttggggtttcatatgtcctgtccatacgcctgatggt
gctccttgtggtttgcttaaccacttgacaatgaactgtattgtgacaaaacatgcagat
aagaagctgcaagctaatataccatctgtgcttcttgacctggggatgagcccactagct
acctccgaaaatattagaaattcgtatattgtgatgcttgatggaaaagtgattggcagg
ctgcaagctaacataatagaaaaagtggtcaataaacttcgcattttgaaaattgatgga
aataaggtgcctccaacaatggagattgtttcagtgctgaagaaggatgggccatcccaa
tatccagggttatttttgttcactggtccagctcgcatgatgagacctgtgatgaactta
cttgttaagaaaattgagcttatcggcacgtttgaacaggtctacatgaatatttgtatc
acaaccgaagaagcttacccagggttaacaactcaccaggaactatcaaaaaccagtttc
ctcagcaatttggcatgtctcattccaatgccggactgtaaccagagtcccagaaacatg
tatcagtgccagatgggaaaacagactatgggtactccatgtcacacgtggcaacttcaa
acagaaacgaaattatacaggttacaaacaccagcaacaccgttattcagaccagtgcat
cacgataatatcaacttggatgattttgctatgggaactaatgcaatagtagcagttata
tcatacacaggctacgacatggaagatgccatgataataaacaaatctgcctatgaacgt
ggttttgcgcatggaatgatttacaaatccgaatttatcgacttgaaagatccaaaaagc
tattttggccgggatcccgataattcaaaacttacagataaattagatcctgatggtttg
ccattttctgggtccactattagagaaggagatccttattacagctactatgacgtagac
aaatctcgttatatgattggtacatatactggtaaagaatttgtctatatcgacaatgta
aaattatgtggtactttaaacaccaagactccacgaagagcttgcatcactttccgtgta
cctcgtaatccaagtgtgggggataagtttgcttcgcgagcagggcagaaaggtatttgc
tcacaaaagtggcctgcagaagatttgccatttactgagacaggattaattccagacatt
gtatttaacccacatggtttccctagccgtatgactattgctatgatgattgaagtcatg
gctggaaagtcagcagctgtgcacggctttgtccatgatgcgacaccattcaggtttaca
gaggaggatacagctgtagattactttggaaaactgttagaagctggtggttataattat
tatggtactgaacgaatgtactctggcatcgatgggcgagaaatgactgctgacattttt
tttggagtagtacattaccaaaggcttcggcacatggtgtctgacaagtggcaggtgaga
agtactggaccagttgatgtactgacccgacaaccaataaaaggacgtagaagaggaggt
ggtgtgagatttggggaaatggaacgagattctctcatctctcacggatgctccttctta
cttcaagatcggctatttcattgttctgataagatcactacactggtgtgtcagaaatgc
gggactttgcttggtcctgtaacagagttggtattgaacaagatgggaatgggtgatcaa
aggacgaggtgtcgcttgtgcaaagatgatggggcagtaggtgaagtggaaataccctac
atatttcgatatttagtcacacaattaacttcgtgtaacataaatatcaaacttgcgatt
agtgaaaagtga
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