Neogale vison (American mink): 122891290
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Entry
122891290 CDS
T08764
Symbol
CD4
Name
(RefSeq) T-cell surface glycoprotein CD4 isoform X1
KO
K06454
T-cell surface glycoprotein CD4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03250
Viral life cycle - HIV-1
nvs03260
Virion - Human immunodeficiency virus
nvs04060
Cytokine-cytokine receptor interaction
nvs04514
Cell adhesion molecules
nvs04612
Antigen processing and presentation
nvs04640
Hematopoietic cell lineage
nvs04658
Th1 and Th2 cell differentiation
nvs04659
Th17 cell differentiation
nvs04660
T cell receptor signaling pathway
nvs05135
Yersinia infection
nvs05166
Human T-cell leukemia virus 1 infection
nvs05170
Human immunodeficiency virus 1 infection
nvs05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
nvs05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122891290 (CD4)
03260 Virion - Human immunodeficiency virus
122891290 (CD4)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122891290 (CD4)
04514 Cell adhesion molecules
122891290 (CD4)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
122891290 (CD4)
04612 Antigen processing and presentation
122891290 (CD4)
04660 T cell receptor signaling pathway
122891290 (CD4)
04658 Th1 and Th2 cell differentiation
122891290 (CD4)
04659 Th17 cell differentiation
122891290 (CD4)
09160 Human Diseases
09161 Cancer: overview
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
122891290 (CD4)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
122891290 (CD4)
05170 Human immunodeficiency virus 1 infection
122891290 (CD4)
09171 Infectious disease: bacterial
05135 Yersinia infection
122891290 (CD4)
09163 Immune disease
05340 Primary immunodeficiency
122891290 (CD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
nvs04090
]
122891290 (CD4)
CD molecules [BR:
nvs04090
]
Proteins
122891290 (CD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD4-extracel
C2-set
Tcell_CD4_C
Ig_3
V-set
ig
Ig_2
I-set
Ig_5
Receptor_2B4
Pilin
Orthoreo_P10
Motif
Other DBs
NCBI-GeneID:
122891290
NCBI-ProteinID:
XP_044082770
LinkDB
All DBs
Position
12:complement(96284425..96324632)
Genome browser
AA seq
462 aa
AA seq
DB search
MNLGAALRHLLLVLELGMLPVVTPGREVVLGKVGDRAELPCNGSVGNNIVFKWMQSTVKI
LGRQNIFWITGASKLKNRVESKKNLWDQGSFPLIIKDLEAADSGVYFCEVDGKKQEVELL
VFNLTAKWDTGSSSDSSNIRLLQGQQLTLTVEAPSGSSPSVQWKGPGSKSKGSGQRLSLP
GLDVQESGTWTCTISQNQKTVVFNINILVLGFQKVSNTVYSREGEQVKFSFPLSFEIENL
SGELRWRTEGAPSSLLWSSFTLENKKVFVKEVHHPRLQLKETLPLSFILPQASSQYAGSG
TLTLSLAKGTLQQEVNLVVMRVMKFPNNLTCEVMGPTSLELTLSLNLEEQAAKVSKQQKL
VSVVEPEDGTWQCLLSDKDKVLLASKVEVLSPVFTKAWPKLLAIVLGGILGLLLLLGLCI
FCCIKCWHRRRQAARMSQIKRLLSEKKTCQCPHRLQKACNLI
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaggagctgctcttaggcatctgctcctggtgctggagttggggatgctcccc
gtcgtcactccggggagagaagtggtgttggggaaggtgggagacagagccgagctgccg
tgcaatggttccgtggggaataacatagtcttcaagtggatgcagtccacggtcaagatc
ctggggcgtcagaacatcttctggatcacaggtgcctccaagctgaagaatcgtgtggaa
tcgaaaaaaaacctgtgggaccaaggatccttccctctgatcatcaaggatcttgaagca
gcagactcaggggtttacttctgtgaggtagacggcaagaagcaagaggtggagctgctg
gtgttcaacctgactgccaagtgggacacgggcagcagcagcgacagcagcaacatccgc
ctgctgcaagggcagcagctgaccctgaccgtggaggccccctctggtagcagcccttcc
gtgcaatggaaaggtccagggagtaaaagcaagggcagtggccaaagactctcgctgcct
gggctggacgtgcaggagagcgggacctggacatgcaccatctcccagaaccagaagaca
gtggtgttcaacataaacatcttggtgctgggtttccagaaggtctctaacacagtctat
tcaagagaaggggagcaggtgaagttctccttcccacttagcttcgagattgaaaacctg
agcggagagctgaggtggcggacagagggcgctccctcctccctgctctggagctccttc
accttggagaacaagaaggtatttgtcaaagaagtccaccaccccagactgcagctgaag
gaaacgctcccactcagctttatcctgccccaggcttcctctcagtatgctggttctgga
accctgaccctgagtcttgccaaggggacactgcagcaggaagtgaatctggtggtgatg
cgagtgatgaagtttccgaacaatttgacctgtgaggtgatgggacccacctccctggag
ttgacgctgagcttgaatctagaagagcaggctgccaaggtctcgaagcagcagaagctg
gtgtcggtggtggagcccgaggacggaacatggcagtgcctactgagtgacaaggacaaa
gtcctgctggcctccaaggttgaggttttgtccccagtgttcaccaaggcctggccaaag
ctcttggccattgtgctgggcgggatcttaggtcttctgcttctccttgggctctgcatc
ttctgctgtattaagtgctggcaccgcaggcggcaggcagcacggatgtctcagatcaag
agactcctcagtgagaagaaaacctgccaatgcccccaccggctccagaaggcatgcaat
ctcatctga
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