Neogale vison (American mink): 122896088
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Entry
122896088 CDS
T08764
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04010
MAPK signaling pathway
nvs04020
Calcium signaling pathway
nvs04713
Circadian entrainment
nvs04925
Aldosterone synthesis and secretion
nvs04927
Cortisol synthesis and secretion
nvs04929
GnRH secretion
nvs04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122896088 (CACNA1H)
04020 Calcium signaling pathway
122896088 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122896088 (CACNA1H)
04925 Aldosterone synthesis and secretion
122896088 (CACNA1H)
04927 Cortisol synthesis and secretion
122896088 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
122896088 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
122896088 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122896088 (CACNA1H)
Ion channels [BR:
nvs04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122896088 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
122896088
NCBI-ProteinID:
XP_044089980
LinkDB
All DBs
Position
14:complement(782732..805115)
Genome browser
AA seq
2238 aa
AA seq
DB search
MLVIMLNCVTLGMFRPCEDVECQSERCSILEAFDDFIFAFFAVEMIIKMVALGLFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDSTFARNNNLTFLRPYYQTEEGEE
NPFICSSRRDNGMQKCSHIPSRRELRVECTLGWEAYGQPQREGPAGAAHNACINWNQYYN
VCRSGGSNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIV
GSFFMINLCLVVIATQFSETKQRENQLMREQRARYLSNDSTLASFSEPGSCYEELLKYVG
HICRKVKRRGLRLYARWQSRWRQKVDPSSGLHGQGPGRRPRRTGRPTASVHHLVYHHHHH
HHHHYHFSHGSPRRPEPGPGDTRLVRAGALPSPPSPGRGPPDAESVHSVYHADCHVEGPQ
ERARVASAAAAAAANLKLASGLRAMNYPTILPSSAGGGKGGTGPGPTGKRAGGPPGAGEH
SPLSLRGADPYEKIQHLVGEHGLGRAPSHLSGLSVPCPLPSPQAGTLTCELKDCPYCASA
LDDPDLEFSDSESGGSEGNAVYEFTQDVRHGDRRDPLRAPPAADAPGQGGTRPRAQRRAA
PGEQGGLGHAWAAFSGKLCRIVDSKYFNRGIMVAILTNTLSMGVEYHEQPDELTSALEIS
NIVFTSMFALEMLLKLLACGPLGYIHNPYNIFDGIIVVISVWEIVGQADGGLSVLRTFRL
LRVLKLVRFLPALRRQLVVLMKTVDNVATFCMLLTLFIFIFSILGMHLFGCKFSLTTDTG
DTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFN
LLVAILVEGFQAEGDANRSDTDEDKTSTHLEEDFDKFSDLRATEMKMYSLAVTPNGHPEG
RGSLPPPLIMRTAATPMPTPKSSPHLDPAPGLLDSRRGSSSSVDPQLSDQKSLSSLRSSP
CAHWGPNSAWSSRRSSWNSLGRAPSLKRRSQCGERESLLSGEGKGSTDEEAEDGRPGAGA
SPETRPVPLRRAESLDHRSSLDVRPPRPAALLPPKSQDCNGQVLALPGEFFLRIDSHKED
PTEFEDDVEDSCCLRLHKMLEPYKPAWCRSREPWALYLFSPQNRFRVTCQKIIAHKMFDH
VVLVFIFLNCITIALERPDIDPGSTERVFLSVSNYIFTAIFVAEMMVKVVALGLVSGGHA
YLQSSWNVLDGLLVLVSLVDIVVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKL
VVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGADTRNISTKAECWAAHY
RWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPVPNHNPWMLLYFISF
LLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRQRRLQRKRRSTFPSPEAQRRP
YYADYSPTRRSIHALCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTV
VFVFEAALKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMSAALPINPTIIRIMR
VLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSE
DNPCEGLSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLSYLPAISPI
YFVTFVLVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAEPDLEEAPGPPAGPPPAAPH
NPDAPGLLVVRKVSVSRVLSLPNDSYMFRPVAPASAPHLRPPREADTAGAATSVHPPPGE
PCSSLQVSSTATLSPARDSDTLHALSPRGAARSPSLSRLLYRQEAMHTDSQEGHVDSPRD
SGPGWGEPGGKTPVRQAPLGPSLRSPPRSPRPSSIRTRKHTFGQRCVSSRPLAPGGEEAE
TPDPADEEVSHITSSARSPSASPTARGGGGRDPDLCGLYGVDAQGFLEQPSQADEQRRAS
GEQGGGDGPPEARELKSRAPEAEPALGARRKKKMSPPCISVDPPVEDEGTARPPPAEGSS
TTLRRRTPSCEVVLHRDSLEPMEGAGVDPGAKGERRAQAACRAEHLTVPNFAFEPLDAGG
PGGGPFLDGGHNVAPEPRVSFSGATVPPEPHKTEPPVSSSDPPEKEWGLHLKVLQSPPKK
AGSPPATPTPGDSVDRPV
NT seq
6717 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcatgctcaactgcgtgaccctgggcatgttccggccctgcgaggacgtc
gagtgccagtcagagcgctgcagcatcctggaggccttcgacgacttcattttcgccttc
ttcgcggtggagatgattatcaagatggtggccctggggctcttcgggcagaagtgctac
ttgggggacacgtggaacaggctggatttcttcattgtcatggcgggcatgatggagtac
tcgctggacgggcacaacgtgagcctctcggccatccggaccgtgcgtgtgctgcggccc
cttcgcgccatcaaccgtgtgcccagcatgcggatcctggtcacgctgctgctggacaca
ctgcccatgctcgggaacgttctcctgctctgcttctttgtcttcttcattttcggcatc
gtgggcgtccagctgtgggctggcctgctgcgcaaccgctgcttcctggacagcaccttt
gccagaaacaacaacctcaccttcctgcggccgtactaccagacggaggagggcgaggag
aatcccttcatctgctcctctcgccgagacaatggcatgcagaagtgctcgcacatcccc
agccgccgggagctgcgcgtggagtgcacgctgggctgggaggcctacgggcagccgcag
cgcgagggcccggccggtgctgcccacaacgcgtgcatcaactggaaccagtattacaat
gtgtgccgctccgggggctccaacccccacaacggcgccatcaacttcgacaacattggc
tacgcgtggatcgccatcttccaggtgatcacgctggagggctgggtggacataatgtac
tacgtcatggatgcgcattccttctacaacttcatctatttcattctgctcatcatcgtg
ggctccttcttcatgatcaatctgtgcctggtggtgatcgccacgcagttctcggagacc
aagcagcgggagaaccagctcatgcgggagcagcgggcgcgctacctgtccaacgacagc
acgctggccagtttttccgagccgggcagctgctacgaggagctgctcaagtatgtgggc
cacatctgccgcaaggtcaagcggcgcggcctgcgtctgtatgcacgctggcagagccgc
tggcgccaaaaggtggaccccagcagcggcctgcacggccagggccctgggcggcggcca
aggcggacgggcaggcccacggcctccgtccaccacctggtgtaccaccaccaccaccac
caccaccaccactaccacttcagccacggcagcccccgccggcccgagcctggccccggg
gacacccggctggtgcgggctggggccttgccctcaccaccctcgccgggccgtgggccc
cccgatgccgagtccgtgcacagcgtgtaccacgcagactgccacgtggaggggccgcag
gagagggcccgggtggcgtccgccgcggccgcggccgccgccaacctcaagctggcctcg
gggctgagagccatgaactaccccaccatcctgccctcatccgcggggggcggcaaaggc
ggcaccggccccgggcccacggggaagcgggctggcgggcctccaggagccggagagcac
agccctctgagcctgaggggtgctgacccctacgagaagatccagcatttggtcggggaa
cacggactgggccgggcccccagccacctctcgggcctgagcgttccctgccccctgccc
agcccccaggcaggcacgctgacctgcgagctgaaggactgtccgtactgcgccagcgcc
ctggacgacccggacctcgagttcagcgactctgagagcggaggctcggaaggcaacgcg
gtgtacgagttcacgcaggacgtgcggcacggggaccgccgcgaccccctgcgggccccc
ccggcggctgacgccccgggccagggcggcacgcggccgcgggcgcagcggcgggcagcc
ccgggcgagcagggcgggctcggccatgcgtgggctgctttcagtggcaagctgtgccgc
atcgtggacagcaagtacttcaaccgtggcatcatggtggccatcctcaccaacacgctg
agcatgggcgtggagtaccatgagcagcccgatgagctgaccagcgccctggagatcagc
aacatcgtcttcaccagcatgtttgccctggagatgctgctgaagctgctggcctgcggt
ccgctgggctacatccacaacccctacaacatcttcgacggcatcatcgtggttatcagc
gtgtgggagatcgtggggcaggcggatggcgggctgtcggtgctgcggaccttccggctg
ctgcgggtgctgaagctggtgcgcttcctgccggcgctgcggcggcagctggtggtgctc
atgaaaaccgtggacaacgtggccaccttctgcatgctgctgacgctcttcatcttcatc
ttcagcatcctgggcatgcacctctttggctgcaagttcagcctgacgacagacaccgga
gacacggtcccggacaggaagaactttgactccctgctgtgggccatcgtcacagtgttc
cagatccttacccaggaggactggaacgtggtcctctacaatggcatggcctccacctcc
tcctgggccgccctctacttcgtggcgctgatgactttcggcaactacgtgctcttcaac
ctgctggtggctatcctggtggagggcttccaggcagagggggatgccaacaggtccgac
acagatgaagacaagacgtccacccacttggaggaggattttgataagttctcagatctc
cgggccactgagatgaagatgtactcactggctgtgacccccaacgggcacccagagggc
cgaggcagcctgccccctcccctcatcatgcgcacggcagctacacccatgcccaccccc
aagagctccccgcacctggacccggcccctggcctcctggactcccggcgaggcagcagc
agctctgtggacccccagctgagcgaccagaagtcactgtccagcctccgaagctcgccc
tgcgcccactggggccccaacagtgcctggagcagccggcgctcgagctggaacagcctg
ggccgtgcacccagcctcaagcggcggagccagtgtggggaacgtgagtccctgctgtct
ggggagggcaagggcagcacggacgaggaggcggaggatggcaggcccggggcaggggcc
tccccagagacacgcccagtcccgctgcggcgtgctgagtccctggaccaccgcagcagc
ctggacgtgcggcccccacggccggctgcgctgctgcccccaaagtcccaggactgcaat
gggcaggtgctggccctgcccggcgagttcttcctgcgcatcgacagccacaaggaggat
cccactgagtttgaggacgacgtggaggatagttgctgcctgcgcctgcacaagatgttg
gaaccctacaagcccgcctggtgtcgcagccgggaaccctgggccctgtacctcttctct
ccgcagaacaggttccgggtcacctgccagaagatcatcgcccacaagatgttcgatcac
gtggtcctggtcttcatcttcctcaactgcatcaccatcgccctagagaggcccgacatc
gacccgggcagcaccgagcgcgtcttcctcagcgtttccaactacatcttcactgcgatc
ttcgtggccgagatgatggtgaaggtggtggccctgggcctggtctccggcggacacgcc
tacctgcagagcagctggaacgtgctggatgggcttctggtcctggtgtccctggtggac
atcgtggtagccatggcctcagccgggggcgccaagatcctgggcatcctgcgcgtgctg
cggctcctgcggactctgcggcccctgagggtcatcagccgagctccaggcctcaagctg
gtggtggagaccctgatatcttcactcaggcccatcgggaacatcgtcctcatctgctgc
gctttcttcatcatctttggcatcctgggggtgcagctcttcaaaggcaagttttactac
tgcgaaggcgcggacaccaggaacatctctaccaaggctgagtgctgggcggctcactac
cgctgggtgcggcgcaagtacaacttcgacaacctgggtcaggcgctgatgtccctgttt
gtgctgtcatccaaggatggctgggtgaacatcatgtatgacgggctggatgccgtgggc
atagaccagcagcccgtgcccaaccacaacccctggatgctgctgtacttcatctccttc
ctgctcatcgtcagctttttcgtgctcaacatgttcgtgggcgtcgtggtggagaatttc
cacaagtgccggcagcaccaggaggccgaggaggcgcggcggcgtgaggagaagcggcag
cggcggctgcagcgcaagcgcaggagcactttccccagcccagaggcccagcgccgcccc
tactacgcggattactcgccgacccgccgctccatccacgcgctctgcactagccactac
ctcgacctcttcatcacgttcattatcggggtcaacgtcatcaccatgtccatggagcac
tacaaccaacccaagtcgctggacgaggccctcaagtattgcaactacgtgttcaccgtc
gtcttcgtcttcgaagccgcgctgaagctggtggctttcgggttccggaggttcttcaag
gacaggtggaaccagctggacctggccattgtgctgctgtccatcatggggatcacgctg
gaggagatcgagatgagcgccgccctgcccatcaaccccaccatcattcgcatcatgcgt
gtgctccgcatcgcccgcgtgctgaagctgctgaagatggccaccggcatgcgggcgctc
ctggacacggtggttcaagccctgccccaggtagggaacctcggcctacttttcatgctc
ctgttttttatctatgctgccctgggggtggagctgttcgggagactcgagtgcagtgag
gacaacccgtgtgagggcttgagccggcacgccacgttctccaacttcggcatggctttc
ctcacgctgttccgcgtgtccaccggggacaactggaacggcatcatgaaggacactctg
cgggagtgcgcccgcgaggacaagcactgcctcagctacctgccggccatctcccccatc
tacttcgtcaccttcgtgctggtggcccaattcgtgctggtcaacgtggtggtggccgtg
ctcatgaagcacctggaggagagcaacaaggaggcccgtgaagacgcggagctggacgcg
gagccagacctggaggaggccccggggcccccagccggccccccgcctgcggccccgcat
aacccggacgcccccggcctcctggtggtgcgcaaggtgtccgtgtccagggtgctgtct
ctgcccaacgacagctacatgttccggcccgtggcacccgcctcggccccacatctccgc
ccgccgcgggaagcggacactgctggcgctgcgacctccgtgcaccccccgcccggggag
ccttgcagctctctccaggtctcctcgacagccacactctccccggcccgggacagcgac
acgctccacgccctgtccccgcggggtgcagcccgctcccccagcctcagccggctgctc
tacagacaggaggccatgcacacggactcgcaggagggacacgttgacagccccagggac
agtggcccgggctggggggagcctggcgggaagacccccgtgaggcaggcacccctgggg
ccctccctacggtccccaccccggtccccgcggcccagcagcatccgcacccgcaaacac
acgtttggacagcgctgcgtctccagtaggccgctggccccaggaggggaggaggccgag
accccagatcctgctgacgaggaggtcagccacatcaccagctcggcccggagcccttca
gcctcgcccactgcccgcggagggggaggcagagacccggacctgtgtgggctctacggc
gtggacgcccagggcttcctggaacagccgagccaggcagatgaacagaggcgggcctct
ggggagcaggggggcggggacgggcccccggaggctcgggagttgaagtctcgggcaccg
gaggccgagccagccttgggggcacgcaggaagaagaagatgagccccccctgcatctcc
gtggacccccctgtggaggacgagggcacggcacggccccccccagccgagggcagcagc
accactctgcggcggcgaaccccgtcctgtgaggtcgtgctgcacagggactccctggag
cccatggagggggcgggggtggaccctggtgccaagggggagcggcgggcccaggccgcc
tgccgcgcggaacacctgaccgtccccaacttcgccttcgagccgctggacgcggggggc
cctggcggaggcccatttttggacggtggccacaatgtggccccagaacccagggtttcc
ttctcaggggctacggtgcctcctgaaccccacaaaacagagcctcctgtttcctccagc
gaccccccagagaaggaatgggggttgcacctcaaagtcctccagagtcccccaaagaaa
gcagggtctcccccagccacccccacccccggggacagtgtagacaggcccgtgtag
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integrated database retrieval system
