Neogale vison (American mink): 122906375
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Entry
122906375 CDS
T08764
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04721
Synaptic vesicle cycle
nvs04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
122906375 (SLC6A4)
04721 Synaptic vesicle cycle
122906375 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvs02000
]
122906375 (SLC6A4)
Transporters [BR:
nvs02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122906375 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
122906375
NCBI-ProteinID:
XP_044104162
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Position
5:27247303..27281064
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AA seq
630 aa
AA seq
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METTPLNSQKELPACKDEDDCQENGVLQKGVPVPEDKVESGHISNGYSAVPSPGAGDDTQ
HALPAATTALVAEPHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMGIFAVIYFSIWKGVKMSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctgcccgcttgtaaggatgaagatgat
tgtcaggaaaatggagttctgcagaagggggtccccgttcctgaggacaaggtggagtct
ggccacatctccaatgggtactcggcggtgccgagccctggtgccggagacgacactcag
cacgcccttccggccgccaccaccgccctagtcgccgagcctcaccaaggggagcgggag
acctggggcaagaagatggatttcctcctgtcggttattggctatgcggtggacctgggc
aacgtctggcgttttccctacatctgctaccagaatggagggggggctttcctcctgccc
tacacgatcatggccattttcggggggatcccactgttctacatggagcttgcgctgggc
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
atcggctatgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
accaactcctggaacacgggcaactgcaccaactatttctcggggaacaacgtcacctgg
acgctgcactcgacgtcccccgctgaagaattttacacgcgccatgtcctgcagatccat
cggtctaagggacttcaggacctgggtggcatcagctggcagctcaccctctgcatcatg
ggcatctttgctgtcatctacttcagcatctggaaaggtgtcaaaatgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttcggtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactg
ctggagacgggagtgtgggtggatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttccggatttgtcatcttc
acggtgctcgggtatatggccgagatgcggaacgaggatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
actttctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgctcgacgagtttccacacatctgggccaag
cgccgggagtggtttgtgcttggtgttgtcattacgtgcttctttggctccctggccacc
ctgactttcggaggggcctacgtggtgaagctgctggaggagtatgccacgggccccgcg
gtgctcaccgttgtcctcatagaggctgtggctgtgtactggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggtcgccatcagccctctctttctcctgttcatcatctgcagttttttgatgagcccg
ccccagctccgacttttccagtataactaccctcagtggagtatcatcctgggttactgc
atagggacctcgtctttcatctgcatccccacatacatagcgtaccggctgatcgtcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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